O31775 (YMDB_BACSU) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized protein ymdB

Gene names

Name:	ymdB
Ordered Locus Names:	BSU16970

Organism

Bacillus subtilis (strain 168) [Reference proteome] [HAMAP]

Taxonomic identifier

224308 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus › Bacillus subtilis group › Bacillus subtilis › Bacillus subtilis subsp. subtilis

Protein attributes

Sequence length	264 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular_function	hydrolase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 264	264	Uncharacterized protein ymdB		PRO_0000361092

Sequences

	Sequence		Length	Mass (Da)
	O31775 [UniParc]. Last modified June 16, 2009. Version 2. Checksum: B0A58FF04DC56D3F	FASTA	264	29,289
	10 20 30 40 50 60 MRILFIGDVV GSPGRDMVKE YVPKLKTKYK PHFTIINGEN AAHGKGLTEK IYHSLIQSGA 70 80 90 100 110 120 DAITMGNHTW DKKEIFDFID DVPNLVRPAN FPEGTPGKGI TYVKANGKEL AVINLQGRTF 130 140 150 160 170 180 LPPLDDPFLK ADELIAEAAK RTPYIFIDFH AEATSEKLAL GWYTDGRASA VVGTHTHVQT 190 200 210 220 230 240 ADNRILPKGT AYITDVGMTG PYDGILGMDR ETIIKRFKTN LPVRFTVAEG KTTLSGVVID 250 260 IDDQTKKAVK IERILINDDH MFFE

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The complete genome sequence of the Gram-positive bacterium Bacillus subtilis." Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V. , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A. Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 168.
[2]	"From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later." Barbe V., Cruveiller S., Kunst F., Lenoble P., Meurice G., Sekowska A., Vallenet D., Wang T., Moszer I., Medigue C., Danchin A. Microbiology 155:1758-1775(2009) [PubMed] [Europe PMC] [Abstract] Cited for: SEQUENCE REVISION TO 135-136.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AL009126 Genomic DNA. Translation: CAB13570.2.
PIR	G69884.
RefSeq	NP_389579.2. NC_000964.3.
3D structure databases
HSSP	HSSP built from PDB template 2CV9 based on UniProtKB Q5SKL8.
ProteinModelPortal	O31775.
SMR	O31775. Positions 1-258.
ModBase	Search...
Protein-protein interaction databases
STRING	224308.BSU16970.
Proteomic databases
PaxDb	O31775.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAB13570; CAB13570; BSU16970.
GeneID	939441.
KEGG	bsu:BSU16970.
PATRIC	18975201. VBIBacSub10457_1792.
Organism-specific databases
GenoList	BSU16970.
Phylogenomic databases
eggNOG	COG1692.
HOGENOM	HOG000011009.
KO	K09769.
ProtClustDB	CLSK2391274.
Enzyme and pathway databases
BioCyc	BSUB:BSU16970-MONOMER.
Family and domain databases
InterPro	IPR005235. CHP00282. IPR004843. Metallo_PEstase_dom. [Graphical view]
Pfam	PF00149. Metallophos. 1 hit. [Graphical view]
PIRSF	PIRSF004789. DR1281. 1 hit.
TIGRFAMs	TIGR00282. TIGR00282. 1 hit.
ProtoNet	Search...

Entry information

Entry name

YMDB_BACSU

Accession

Primary (citable) accession number: O31775

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 20, 2009
Last sequence update:	June 16, 2009
Last modified:	May 1, 2013
This is version 71 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program