O31698 (YKUL_BACSU) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
CBS domain-containing protein ykuL

Gene names

Name:	ykuL
Ordered Locus Names:	BSU14130

Organism

Bacillus subtilis

Taxonomic identifier

1423 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length	147 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Contains 1 CBS domain.

Ontologies

Keywords
Domain	CBS domain
Technical term	3D-structure Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

1 – 147

147

CBS domain-containing protein ykuL

PRO_0000360536

Regions

Domain

18 – 78

61

CBS

Experimental info

Sequence conflict

48

1

I → T in CAA10875. Ref.1

Secondary structure

1

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147

Helix Strand Turn

Details...

Helix

21 – 23

3

Helix

33 – 42

10

Helix

64 – 70

7

Helix

78 – 80

3

Turn

81 – 83

3

Helix

86 – 89

4

Beta strand

96 – 98

3

Turn

110 – 112

3

Beta strand

116 – 119

4

Helix

131 – 141

11

Sequences

	Sequence		Length	Mass (Da)
	O31698 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: 5BA2FAB05BF72EAB	FASTA	147	16,635
	10 20 30 40 50 60 MISLQSDQLL EATVGQFMIE ADKVAHVQVG NNLEHALLVL TKTGYTAIPV LDPSYRLHGL 70 80 90 100 110 120 IGTNMIMNSI FGLERIEFEK LDQITVEEVM LTDIPRLHIN DPIMKGFGMV INNGFVCVEN 130 140 DEQVFEGIFT RRVVLKELNK HIRSLNK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Sequence of the Bacillus subtilis chromosome from ykuA to cse-15." Scanlan E., Devine K.M. Submitted (NOV-1997) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: 168.
[2]	"The complete genome sequence of the Gram-positive bacterium Bacillus subtilis." Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V. , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A. Nature 390:249-256(1997) [PubMed: 9384377] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 168.
[3]	"Crystal structure of a hypothetical protein (ykuL) containing CBS domains from Bacillus subtilis." New York structural genomix research consortium (NYSGXRC) Submitted (JAN-2005) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.1 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AJ222587 Genomic DNA. Translation: CAA10875.1.
AL009126 Genomic DNA. Translation: CAB13286.1.

PIR

A69866.

RefSeq

NP_389296.1. NC_000964.3.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1YAV	X-ray	2.10	A/B	2-147	[»]

ProteinModelPortal

O31698.

SMR

O31698. Positions 11-145.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblBacteria

EBBACT00000000123; EBBACP00000000123; EBBACG00000000123.

GeneID

939199.

GenomeReviews

Gene locus BSU14130 in contig AL009126_GR.

KEGG

bsu:BSU14130.

NMPDR

fig|224308.1.peg.1415.

PATRIC

18974615. VBIBacSub10457_1499.

Organism-specific databases

GenoList

BSU14130.

Phylogenomic databases

GeneTree

EBGT00050000001464.

HOGENOM

HBG697236.

OMA

IFTRRVV.

PhylomeDB

O31698.

ProtClustDB

CLSK2460912.

Enzyme and pathway databases

BioCyc

BSUB:BSU14130-MONOMER.

Family and domain databases

InterPro

IPR000644. Cysta_beta_synth_core.
[Graphical view]

Pfam

PF00571. CBS. 1 hit.
[Graphical view]

PROSITE

PS51371. CBS. False negative.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

YKUL_BACSU

Accession

Primary (citable) accession number: O31698
Secondary accession number(s): O31402

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 20, 2009
Last sequence update:	January 1, 1998
Last modified:	January 25, 2012
This is version 66 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program