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Protein

Uncharacterized HTH-type transcriptional regulator YkvZ

Gene

ykvZ

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi4 – 23H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding, Repressor
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciBSUB:BSU13870-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator YkvZ
Gene namesi
Name:ykvZ
Ordered Locus Names:BSU13870
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001080071 – 321Uncharacterized HTH-type transcriptional regulator YkvZAdd BLAST321

Proteomic databases

PaxDbiO31690
PRIDEiO31690

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100007701

Structurei

3D structure databases

ProteinModelPortaliO31690
SMRiO31690
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 56HTH lacI-typePROSITE-ProRule annotationAdd BLAST56

Phylogenomic databases

HOGENOMiHOG000220180
InParanoidiO31690
OMAiQGWYKAM
PhylomeDBiO31690

Family and domain databases

CDDicd01392 HTH_LacI, 1 hit
InterProiView protein in InterPro
IPR000843 HTH_LacI
IPR010982 Lambda_DNA-bd_dom_sf
IPR001761 Peripla_BP/Lac1_sug-bd_dom
IPR028082 Peripla_BP_I
PfamiView protein in Pfam
PF00356 LacI, 1 hit
PF00532 Peripla_BP_1, 1 hit
PRINTSiPR00036 HTHLACI
SMARTiView protein in SMART
SM00354 HTH_LACI, 1 hit
SUPFAMiSSF47413 SSF47413, 1 hit
SSF53822 SSF53822, 1 hit
PROSITEiView protein in PROSITE
PS00356 HTH_LACI_1, 1 hit
PS50932 HTH_LACI_2, 1 hit

Sequencei

Sequence statusi: Complete.

O31690-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MANIKDIAEK AGVSVTTVSR VINNHPYVSE DKRKRVFEAM ESLEYTRNIH
60 70 80 90 100
AVHLSKGFSN MIGVVLPTVN LPYFAELIAG IADAAAESGV HLSLFQTNYE
110 120 130 140 150
VQKEIFALSQ LKQRQVDGLI FCSKALADEK LMEWEGPILL CQNSDNARFP
160 170 180 190 200
TISIPHQEAF RNGLDYLIAK GHKKIAICLA RKKGMNSHFR IKAYKEALEE
210 220 230 240 250
IGEAFREDWV IEKAITINDG KALFHKWNTW KEKPTAIFVA NDQVSAGLFL
260 270 280 290 300
EAKNQRVSVP DELAILSVDN HEISQALGIT TIDIQTREMG KQAFAILEKR
310 320
IQGQPIERKV LDYRLIERST V
Length:321
Mass (Da):36,192
Last modified:January 1, 1998 - v1
Checksum:i1A41EAF152702231
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL009126 Genomic DNA Translation: CAB13260.1
PIRiH69869
RefSeqiNP_389270.1, NC_000964.3
WP_003244772.1, NZ_JNCM01000035.1

Genome annotation databases

EnsemblBacteriaiCAB13260; CAB13260; BSU13870
GeneIDi936232
KEGGibsu:BSU13870
PATRICifig|224308.179.peg.1513

Entry informationi

Entry nameiYKVZ_BACSU
AccessioniPrimary (citable) accession number: O31690
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 24, 2003
Last sequence update: January 1, 1998
Last modified: May 23, 2018
This is version 108 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

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