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Protein

Uncharacterized oxidoreductase YjdA

Gene

yjdA

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei148 – 1481SubstrateBy similarity
Active sitei161 – 1611Proton acceptorPROSITE-ProRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi12 – 2110NAD or NADPBy similarity

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Enzyme and pathway databases

BioCyciBSUB:BSU11980-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized oxidoreductase YjdA (EC:1.-.-.-)
Gene namesi
Name:yjdA
Ordered Locus Names:BSU11980
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 251251Uncharacterized oxidoreductase YjdAPRO_0000376997Add
BLAST

Proteomic databases

PaxDbiO31642.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100006626.

Structurei

3D structure databases

ProteinModelPortaliO31642.
SMRiO31642. Positions 3-250.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4108PSK. Bacteria.
COG1028. LUCA.
InParanoidiO31642.
OMAiPFGRIGE.
PhylomeDBiO31642.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR020904. Sc_DH/Rdtase_CS.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 2 hits.
PRINTSiPR00081. GDHRDH.
PR00080. SDRFAMILY.
SUPFAMiSSF51735. SSF51735. 1 hit.
PROSITEiPS00061. ADH_SHORT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O31642-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSHSQEKIAL ITGASSQGDI GTAICRKLAS QGIHIFFTHW NSDTAWIEEF
60 70 80 90 100
QQEILRMGVR CEAMKIDLSD AHAAFTIHEK ISDKLGYPSI LINNAAHSAS
110 120 130 140 150
DNYVSLDAKS LDEHYAVNMR SNFLLCVEFA RRFKKSNLIS GRIINMTSGQ
160 170 180 190 200
DLGPLPGELA YAATKGAISA FTRSLSQELA PLGITVNAVN PGPTDSTWMT
210 220 230 240 250
DEIRNFLSPK FPMGRIGTPD DAARMIAFLA SDEAEWITGQ IIHSEGGFIR

G
Length:251
Mass (Da):27,449
Last modified:January 1, 1998 - v1
Checksum:i801F4CAEF10EF77D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL009126 Genomic DNA. Translation: CAB13055.1.
PIRiD69848.
RefSeqiNP_389080.1. NC_000964.3.
WP_003245148.1. NZ_JNCM01000035.1.

Genome annotation databases

EnsemblBacteriaiCAB13055; CAB13055; BSU11980.
GeneIDi939818.
KEGGibsu:BSU11980.
PATRICi18974125. VBIBacSub10457_1255.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL009126 Genomic DNA. Translation: CAB13055.1.
PIRiD69848.
RefSeqiNP_389080.1. NC_000964.3.
WP_003245148.1. NZ_JNCM01000035.1.

3D structure databases

ProteinModelPortaliO31642.
SMRiO31642. Positions 3-250.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100006626.

Proteomic databases

PaxDbiO31642.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB13055; CAB13055; BSU11980.
GeneIDi939818.
KEGGibsu:BSU11980.
PATRICi18974125. VBIBacSub10457_1255.

Phylogenomic databases

eggNOGiENOG4108PSK. Bacteria.
COG1028. LUCA.
InParanoidiO31642.
OMAiPFGRIGE.
PhylomeDBiO31642.

Enzyme and pathway databases

BioCyciBSUB:BSU11980-MONOMER.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR020904. Sc_DH/Rdtase_CS.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 2 hits.
PRINTSiPR00081. GDHRDH.
PR00080. SDRFAMILY.
SUPFAMiSSF51735. SSF51735. 1 hit.
PROSITEiPS00061. ADH_SHORT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYJDA_BACSU
AccessioniPrimary (citable) accession number: O31642
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 16, 2009
Last sequence update: January 1, 1998
Last modified: September 7, 2016
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.