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Protein

Uncharacterized protein YfhD

Gene

yfhD

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciBSUB:BSU08490-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YfhD
Gene namesi
Name:yfhD
Ordered Locus Names:BSU08490
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001570 Componenti: Chromosome

Organism-specific databases

GenoListiBSU08490.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 6363Uncharacterized protein YfhDPRO_0000049521Add
BLAST

Proteomic databases

PaxDbiO31572.

Interactioni

Protein-protein interaction databases

STRINGi224308.BSU08490.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG323235.
HOGENOMiHOG000261765.
OMAiPQVPKQL.
OrthoDBiEOG61P6XG.

Family and domain databases

InterProiIPR025435. YfhD-like.
[Graphical view]
PfamiPF14151. YfhD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O31572-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRNHIHKNR DKNKQKLPQV PDALKRETDG VYEEYSTELA DADDREAQER
60
AKAADNRAKK KSR
Length:63
Mass (Da):7,322
Last modified:January 1, 1998 - v1
Checksum:iEFC66872DBA2E434
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D85082 Genomic DNA. Translation: BAA24470.1.
AL009126 Genomic DNA. Translation: CAB12678.1.
PIRiE69800.
RefSeqiNP_388730.1. NC_000964.3.

Genome annotation databases

EnsemblBacteriaiCAB12678; CAB12678; BSU08490.
GeneIDi939709.
KEGGibsu:BSU08490.
PATRICi18973348. VBIBacSub10457_0888.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D85082 Genomic DNA. Translation: BAA24470.1.
AL009126 Genomic DNA. Translation: CAB12678.1.
PIRiE69800.
RefSeqiNP_388730.1. NC_000964.3.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.BSU08490.

Proteomic databases

PaxDbiO31572.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB12678; CAB12678; BSU08490.
GeneIDi939709.
KEGGibsu:BSU08490.
PATRICi18973348. VBIBacSub10457_0888.

Organism-specific databases

GenoListiBSU08490.

Phylogenomic databases

eggNOGiNOG323235.
HOGENOMiHOG000261765.
OMAiPQVPKQL.
OrthoDBiEOG61P6XG.

Enzyme and pathway databases

BioCyciBSUB:BSU08490-MONOMER.

Family and domain databases

InterProiIPR025435. YfhD-like.
[Graphical view]
PfamiPF14151. YfhD. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Cloning and sequencing of a 27.8-kb nucleotide sequence of the 79 degrees-81 degrees region of the Bacillus subtilis genome containing the sspE locus."
    Yamamoto H., Uchiyama S., Sekiguchi J.
    DNA Res. 3:257-262(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.

Entry informationi

Entry nameiYFHD_BACSU
AccessioniPrimary (citable) accession number: O31572
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 11, 2003
Last sequence update: January 1, 1998
Last modified: January 7, 2015
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.