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Protein

Uncharacterized HTH-type transcriptional regulator YfiV

Gene

yfiV

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi66 – 89H-T-H motifPROSITE-ProRule annotationAdd BLAST24

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciBSUB:BSU08410-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator YfiV
Gene namesi
Name:yfiV
Ordered Locus Names:BSU08410
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003605281 – 160Uncharacterized HTH-type transcriptional regulator YfiVAdd BLAST160

Proteomic databases

PaxDbiO31564
PRIDEiO31564

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100004663

Structurei

3D structure databases

ProteinModelPortaliO31564
SMRiO31564
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini20 – 152HTH marR-typePROSITE-ProRule annotationAdd BLAST133

Phylogenomic databases

eggNOGiENOG410834F Bacteria
ENOG410XUB6 LUCA
HOGENOMiHOG000008809
InParanoidiO31564
OMAiEKMGASL
PhylomeDBiO31564

Family and domain databases

CDDicd00090 HTH_ARSR, 1 hit
Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR011991 ArsR-like_HTH
IPR000835 HTH_MarR-typ
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF01047 MarR, 1 hit
PRINTSiPR00598 HTHMARR
SMARTiView protein in SMART
SM00347 HTH_MARR, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS50995 HTH_MARR_2, 1 hit

Sequencei

Sequence statusi: Complete.

O31564-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEYNLHDTTV LNENILSSEE REIWVLYMKV LTSAGLGDVS EWMKLDMSMP
60 70 80 90 100
QMKVLMLLNN HGTLKVSDIA EKMGASLSNT TGLLDRLEKS GFVKRSHSEE
110 120 130 140 150
DRRSVVVQLT ENAKKIFRGL YEKGHLKLKR SLELLSPEEK QAVYEGLSIL
160
SRALENAKKE
Length:160
Mass (Da):18,211
Last modified:January 1, 1998 - v1
Checksum:iE09A1A0B704CDC6B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D85082 Genomic DNA Translation: BAA24462.1
AL009126 Genomic DNA Translation: CAB12670.1
PIRiH69804
RefSeqiNP_388722.1, NC_000964.3
WP_003244538.1, NZ_JNCM01000032.1

Genome annotation databases

EnsemblBacteriaiCAB12670; CAB12670; BSU08410
GeneIDi939218
KEGGibsu:BSU08410
PATRICifig|224308.179.peg.909

Entry informationi

Entry nameiYFIV_BACSU
AccessioniPrimary (citable) accession number: O31564
Secondary accession number(s): Q79EW5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: January 1, 1998
Last modified: May 23, 2018
This is version 106 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

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