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Reviewed, UniProtKB/Swiss-Prot O31528 (RHGT2_BACSU)

Last modified May 5, 2009. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Probable rhamnogalacturonan acetylesterase yesY
      Short name=RGAE
    EC=3.1.1.-
Gene names
Name: yesY
Ordered Locus Names: BSU07070
OrganismBacillus subtilis [Complete proteome] [HAMAP]
Taxonomic identifier1423 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacillalesBacillaceaeBacillus

Protein attributes

Sequence length217 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

General annotation (Comments)

Function

May play role in the degradation of rhamnogalacturonan derived from plant cell walls. Probably has broad substrate specificity and may degrade several types of acetylated substrates. Ref.2

Induction

Up-regulated by growth on type I rhamnogalacturonan. Ref.2

Sequence similarities

Belongs to the 'GDSL' lipolytic enzyme family.

Ontologies

Keywords
   Molecular functionHydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processlipid metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionhydrolase activity, acting on ester bonds

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 217217Probable rhamnogalacturonan acetylesterase yesY
PRO_0000364433

Sites

Active site111 By similarity
Active site1851 By similarity

Sequences

Sequence LengthMass (Da)Tools
O31528-1 [UniParc].

Last modified January 1, 1998. Version 1.
Checksum: 7FF4EC62C4C473F2

FASTA21724,594
        10         20         30         40         50         60 
MANHIYLAGD STVQTYGDST NQGGWGQFLG SHLPEHIQVI NRAIGGRSSK TFVEEGRLQA 

        70         80         90        100        110        120 
ILDVIEPDDW LFVQMGHNDA SKNKPERYTE PYTTYKQYLK QYIAGAREKG AHPLLITPVA 

       130        140        150        160        170        180 
RFHYENGVFL NDFPDYCIAM KQTAAEENVQ LIDLMEKSLA FFTEKGEEKV YTYFMISEGI 

       190        200        210 
NDYTHFTKKG ANEMAKLVAK GIKELGLPLT ESIIKER 

« Hide

References

« Hide 'large scale' references
[1]"The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V. expand/collapse author list , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
Nature 390:249-256(1997) [PubMed: 9384377] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 168.
[2]"Plant cell wall degradation by saprophytic Bacillus subtilis strains: gene clusters responsible for rhamnogalacturonan depolymerization."
Ochiai A., Itoh T., Kawamata A., Hashimoto W., Murata K.
Appl. Environ. Microbiol. 73:3803-3813(2007) [PubMed: 17449691] [Abstract]
Cited for: FUNCTION IN DEGRADATION OF TYPE I RHAMNOGALACTURONAN, INDUCTION.
Strain: 168.

Cross-references

Sequence databases

AL009126 Genomic DNA. Translation: CAB12526.1.
PIRH69797.
RefSeqNP_388588.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID938772.
GenomeReviewsGene locus BSU07070 in contig AL009126_GR.
KEGGbsu:BSU07070.
NMPDRfig|224308.1.peg.707.

Organism-specific databases

SubtiListBG12859. yesY. [Micado]
CMRSearch...

Phylogenomic databases

HOGENOMO31528.
OMAO31528. GHNDASK.

Enzyme and pathway databases

BioCycBSUB224308:BSU0707-MON.

Family and domain databases

InterProIPR013831. Esterase_SGNH_hydro-type_subgr.
IPR001087. Lipase_GDSL.
IPR008265. Lipase_GDSL_AS.
[Graphical view]
Gene3DG3DSA:3.40.50.1110. Esterase_SGNH_hydro-type_subgr. 1 hit.
PfamPF00657. Lipase_GDSL. 1 hit.
[Graphical view]
PROSITEPS01098. LIPASE_GDSL_SER. False negative.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRHGT2_BACSU
AccessionPrimary (citable) accession number: O31528
Entry history
Integrated into UniProtKB/Swiss-Prot: March 3, 2009
Last sequence update: January 1, 1998
Last modified: May 5, 2009
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Bacillus subtilis

Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents