O31528 (RHGT2_BACSU) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 56.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Probable rhamnogalacturonan acetylesterase yesY Short name=RGAE EC=3.1.1.- | ||||
| Gene names |
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| Organism | Bacillus subtilis | ||||
| Taxonomic identifier | 1423 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus |
Protein attributes
| Sequence length | 217 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | May play role in the degradation of rhamnogalacturonan derived from plant cell walls. Probably has broad substrate specificity and may degrade several types of acetylated substrates. Ref.2 |
| Induction | Up-regulated by growth on type I rhamnogalacturonan. Ref.2 |
| Sequence similarities | Belongs to the 'GDSL' lipolytic enzyme family. |
Ontologies
| Keywords | |
|---|---|
| Molecular function | Hydrolase |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | lipid metabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular function | hydrolase activity, acting on ester bonds Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis." Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V. Danchin A.Nature 390:249-256(1997) [PubMed: 9384377] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 168. |
| [2] | "Plant cell wall degradation by saprophytic Bacillus subtilis strains: gene clusters responsible for rhamnogalacturonan depolymerization." Ochiai A., Itoh T., Kawamata A., Hashimoto W., Murata K. Appl. Environ. Microbiol. 73:3803-3813(2007) [PubMed: 17449691] [Abstract] Cited for: FUNCTION IN DEGRADATION OF TYPE I RHAMNOGALACTURONAN, INDUCTION. Strain: 168. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AL009126 Genomic DNA. Translation: CAB12526.1. |
| PIR | H69797. |
| RefSeq | NP_388588.1. NC_000964.3. |
3D structure databases | |
| ProteinModelPortal | O31528. |
| SMR | O31528. Positions 3-215. |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | EBBACT00000003862; EBBACP00000003862; EBBACG00000003854. |
| GeneID | 938772. |
| GenomeReviews | Gene locus BSU07070 in contig AL009126_GR. |
| KEGG | bsu:BSU07070. |
| NMPDR | fig|224308.1.peg.707. |
| PATRIC | 18973062. VBIBacSub10457_0745. |
Organism-specific databases | |
| GenoList | BSU07070. |
Phylogenomic databases | |
| GeneTree | EBGT00050000006183. |
| HOGENOM | HBG400724. |
| OMA | GHNDASK. |
| PhylomeDB | O31528. |
| ProtClustDB | CLSK886830. |
Enzyme and pathway databases | |
| BioCyc | BSUB:BSU07070-MONOMER. |
Family and domain databases | |
| InterPro | IPR013830. Esterase_SGNH_hydro-type. IPR013831. Esterase_SGNH_hydro-type_subgr. IPR001087. Lipase_GDSL. [Graphical view] |
| Gene3D | G3DSA:3.40.50.1110. Esterase_SGNH_hydro-type_subgr. 1 hit. |
| Pfam | PF00657. Lipase_GDSL. 1 hit. [Graphical view] |
| SUPFAM | SSF52266. Esterase_SGNH_hydro-type. 1 hit. |
| PROSITE | PS01098. LIPASE_GDSL_SER. False negative. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | RHGT2_BACSU | ||||||||
| Accession | Primary (citable) accession number: O31528 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| Bacillus subtilis Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList |
| SIMILARITY comments Index of protein domains and families |

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