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Protein

Uncharacterized HTH-type transcriptional regulator YczG

Gene

yczG

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi40 – 6324H-T-H motifPROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Repressor

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciBSUB:BSU03880-MONOMER.
RETL1328306-WGS:GSTH-1077-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator YczG
Gene namesi
Name:yczG
Ordered Locus Names:BSU03880
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 104104Uncharacterized HTH-type transcriptional regulator YczGPRO_0000360059Add
BLAST

Proteomic databases

PaxDbiO31480.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100002188.

Structurei

3D structure databases

ProteinModelPortaliO31480.
SMRiO31480. Positions 14-103.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini6 – 10095HTH arsR-typePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 HTH arsR-type DNA-binding domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG4105YVS. Bacteria.
COG0640. LUCA.
HOGENOMiHOG000144506.
InParanoidiO31480.
OMAiAIAKSTM.
PhylomeDBiO31480.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR001845. HTH_ArsR_DNA-bd_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF01022. HTH_5. 1 hit.
[Graphical view]
PRINTSiPR00778. HTHARSR.
SMARTiSM00418. HTH_ARSR. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50987. HTH_ARSR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O31480-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNIPNHPETE TLQLTKVLHA LSDPLRLELV KQLAEAKEKT CSTCADVQVA
60 70 80 90 100
KSTLSHHFKV LRESGIAQVR IEGKRRYYSL RAEDLEKAFP GLLEAVLNVD

QDRW
Length:104
Mass (Da):11,838
Last modified:January 1, 1998 - v1
Checksum:i30786C930DBF898D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL009126 Genomic DNA. Translation: CAB12196.1.
PIRiE69767.
RefSeqiNP_388270.1. NC_000964.3.
WP_003234476.1. NZ_JNCM01000031.1.

Genome annotation databases

EnsemblBacteriaiCAB12196; CAB12196; BSU03880.
GeneIDi938272.
KEGGibsu:BSU03880.
PATRICi18972350. VBIBacSub10457_0403.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL009126 Genomic DNA. Translation: CAB12196.1.
PIRiE69767.
RefSeqiNP_388270.1. NC_000964.3.
WP_003234476.1. NZ_JNCM01000031.1.

3D structure databases

ProteinModelPortaliO31480.
SMRiO31480. Positions 14-103.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100002188.

Proteomic databases

PaxDbiO31480.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB12196; CAB12196; BSU03880.
GeneIDi938272.
KEGGibsu:BSU03880.
PATRICi18972350. VBIBacSub10457_0403.

Phylogenomic databases

eggNOGiENOG4105YVS. Bacteria.
COG0640. LUCA.
HOGENOMiHOG000144506.
InParanoidiO31480.
OMAiAIAKSTM.
PhylomeDBiO31480.

Enzyme and pathway databases

BioCyciBSUB:BSU03880-MONOMER.
RETL1328306-WGS:GSTH-1077-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR001845. HTH_ArsR_DNA-bd_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF01022. HTH_5. 1 hit.
[Graphical view]
PRINTSiPR00778. HTHARSR.
SMARTiSM00418. HTH_ARSR. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50987. HTH_ARSR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYCZG_BACSU
AccessioniPrimary (citable) accession number: O31480
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: January 1, 1998
Last modified: September 7, 2016
This is version 103 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.