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Protein

Ferredoxin--NADP reductase 1

Gene

ycgT

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

2 reduced ferredoxin + NADP+ + H+ = 2 oxidized ferredoxin + NADPH.UniRule annotation

Cofactori

FADUniRule annotationNote: Binds 1 FAD per subunit.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei37 – 371FADUniRule annotation
Binding sitei45 – 451FADUniRule annotation
Binding sitei50 – 501FADUniRule annotation
Binding sitei90 – 901FAD; via amide nitrogen and carbonyl oxygenUniRule annotation
Binding sitei125 – 1251FAD; via amide nitrogenUniRule annotation
Binding sitei287 – 2871FADUniRule annotation
Binding sitei328 – 3281FADUniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Ligandi

FAD, Flavoprotein, NADP

Enzyme and pathway databases

BioCyciBSUB:BSU03270-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ferredoxin--NADP reductase 1UniRule annotation (EC:1.18.1.2UniRule annotation)
Short name:
FNR 1UniRule annotation
Short name:
Fd-NADP(+) reductase 1UniRule annotation
Gene namesi
Name:ycgT
Ordered Locus Names:BSU03270
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 336336Ferredoxin--NADP reductase 1PRO_0000364801Add
BLAST

Proteomic databases

PaxDbiO31475.
PRIDEiO31475.

Interactioni

Subunit structurei

Homodimer.UniRule annotation

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100001823.

Structurei

3D structure databases

ProteinModelPortaliO31475.
SMRiO31475. Positions 6-330.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ferredoxin--NADP reductase type 2 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0492. LUCA.
HOGENOMiHOG000072909.
InParanoidiO31475.
KOiK00384.
OMAiFYSGMRD.
OrthoDBiEOG661H9M.
PhylomeDBiO31475.

Family and domain databases

Gene3Di3.50.50.60. 3 hits.
HAMAPiMF_01685. FENR2.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR022890. Fd--NADP_Rdtase_type_2.
IPR000103. Pyridine_nuc-diS_OxRdtase_2.
[Graphical view]
PfamiPF07992. Pyr_redox_2. 1 hit.
[Graphical view]
PRINTSiPR00469. PNDRDTASEII.
SUPFAMiSSF51905. SSF51905. 1 hit.

Sequencei

Sequence statusi: Complete.

O31475-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAENQEVYDV TIIGGGPIGL FTAFYCGMRE LKTKVIEFLP KLGGKVSLFF
60 70 80 90 100
PEKIIRDIGG IPGIAGKQLI EQLKEQAATF DPDIVLNQRV TGFERLDDGT
110 120 130 140 150
IVLTGSEGKK HYTRTVILAC GMGTLEVNEF DSEDAARYAG KNLHYGVEKL
160 170 180 190 200
DAFKGKRVVI SGGGDTAVDW ANELEPIAAS VTVVHRREEF GGMESSVTKM
210 220 230 240 250
KQSSVRVLTP YRLEQLNGDE EGIKSVTVCH TESGQRKDIE IDELIINHGF
260 270 280 290 300
KIDLGPMMEW GLEIEEGRVK ADRHMRTNLP GVFVAGDAAF YESKLRLIAG
310 320 330
GFTEGPTAVN SAKAYLDPKA ENMAMYSTHH KKLVHK
Length:336
Mass (Da):36,967
Last modified:January 1, 1998 - v1
Checksum:iBF7F1617376AD742
GO

Sequence cautioni

The sequence BAA08961.1 differs from that shown. Reason: Frameshift at positions 49 and 104. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D50453 Genomic DNA. Translation: BAA08961.1. Frameshift.
AL009126 Genomic DNA. Translation: CAB12121.1.
PIRiG69759.
RefSeqiNP_388209.1. NC_000964.3.
WP_003234643.1. NZ_JNCM01000030.1.

Genome annotation databases

EnsemblBacteriaiCAB12121; CAB12121; BSU03270.
GeneIDi938327.
KEGGibsu:BSU03270.
PATRICi18972213. VBIBacSub10457_0335.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D50453 Genomic DNA. Translation: BAA08961.1. Frameshift.
AL009126 Genomic DNA. Translation: CAB12121.1.
PIRiG69759.
RefSeqiNP_388209.1. NC_000964.3.
WP_003234643.1. NZ_JNCM01000030.1.

3D structure databases

ProteinModelPortaliO31475.
SMRiO31475. Positions 6-330.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100001823.

Proteomic databases

PaxDbiO31475.
PRIDEiO31475.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB12121; CAB12121; BSU03270.
GeneIDi938327.
KEGGibsu:BSU03270.
PATRICi18972213. VBIBacSub10457_0335.

Phylogenomic databases

eggNOGiCOG0492. LUCA.
HOGENOMiHOG000072909.
InParanoidiO31475.
KOiK00384.
OMAiFYSGMRD.
OrthoDBiEOG661H9M.
PhylomeDBiO31475.

Enzyme and pathway databases

BioCyciBSUB:BSU03270-MONOMER.

Family and domain databases

Gene3Di3.50.50.60. 3 hits.
HAMAPiMF_01685. FENR2.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR022890. Fd--NADP_Rdtase_type_2.
IPR000103. Pyridine_nuc-diS_OxRdtase_2.
[Graphical view]
PfamiPF07992. Pyr_redox_2. 1 hit.
[Graphical view]
PRINTSiPR00469. PNDRDTASEII.
SUPFAMiSSF51905. SSF51905. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The 25 degrees-36 degrees region of the Bacillus subtilis chromosome: determination of the sequence of a 146 kb segment and identification of 113 genes."
    Yamane K., Kumano M., Kurita K.
    Microbiology 142:3047-3056(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168.
  2. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.

Entry informationi

Entry nameiFENR1_BACSU
AccessioniPrimary (citable) accession number: O31475
Secondary accession number(s): P94397
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 3, 2009
Last sequence update: January 1, 1998
Last modified: February 17, 2016
This is version 101 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.