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O30709

- CCMK_SYNP2

UniProt

O30709 - CCMK_SYNP2

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Protein

Carbon dioxide-concentrating mechanism protein CcmK

Gene

ccmK

Organism
Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered.

Enzyme and pathway databases

BioCyciSSP32049:GKF7-1803-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Carbon dioxide-concentrating mechanism protein CcmK
Alternative name(s):
Carboxysome shell protein CsoS1
Gene namesi
Name:ccmK
Synonyms:csoS1
Ordered Locus Names:SYNPCC7002_A1802
OrganismiSynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)
Taxonomic identifieri32049 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000001688: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 112112Carbon dioxide-concentrating mechanism protein CcmKPRO_0000201502Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi32049.SYNPCC7002_A1802.

Structurei

3D structure databases

ProteinModelPortaliO30709.
SMRiO30709. Positions 2-101.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG4577.
HOGENOMiHOG000286836.
KOiK08696.
OMAiRPHNDIS.
OrthoDBiEOG6ZH2H4.

Family and domain databases

InterProiIPR020808. Bact_microcomp_CS.
IPR000249. Microcompartment_bac.
[Graphical view]
PfamiPF00936. BMC. 1 hit.
[Graphical view]
SMARTiSM00877. BMC. 1 hit.
[Graphical view]
PROSITEiPS01139. BACT_MICROCOMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O30709-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSIAVGMVET LGFPAVVEAA DAMVKAARVT LVGYEKIGSG RVTVIVRGDV
60 70 80 90 100
SEVQASVSAG TDNVSRVNGG QVLSTHIIAR PHENLEYVLP IRYTEAVEQF
110
RESVNPQPLR RV
Length:112
Mass (Da):12,033
Last modified:June 10, 2008 - v2
Checksum:iAA5606657F41B0AC
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti2 – 21S → P in AAB66835. 1 PublicationCurated
Sequence conflicti8 – 81V → I in AAB66835. 1 PublicationCurated
Sequence conflicti11 – 111L → R in AAB66835. 1 PublicationCurated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF015889 Genomic DNA. Translation: AAB66835.1.
CP000951 Genomic DNA. Translation: ACA99790.1.
RefSeqiYP_001735046.1. NC_010475.1.

Genome annotation databases

EnsemblBacteriaiACA99790; ACA99790; SYNPCC7002_A1802.
GeneIDi6056529.
KEGGisyp:SYNPCC7002_A1802.
PATRICi23818234. VBISynSp37135_2058.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF015889 Genomic DNA. Translation: AAB66835.1 .
CP000951 Genomic DNA. Translation: ACA99790.1 .
RefSeqi YP_001735046.1. NC_010475.1.

3D structure databases

ProteinModelPortali O30709.
SMRi O30709. Positions 2-101.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 32049.SYNPCC7002_A1802.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACA99790 ; ACA99790 ; SYNPCC7002_A1802 .
GeneIDi 6056529.
KEGGi syp:SYNPCC7002_A1802.
PATRICi 23818234. VBISynSp37135_2058.

Phylogenomic databases

eggNOGi COG4577.
HOGENOMi HOG000286836.
KOi K08696.
OMAi RPHNDIS.
OrthoDBi EOG6ZH2H4.

Enzyme and pathway databases

BioCyci SSP32049:GKF7-1803-MONOMER.

Family and domain databases

InterProi IPR020808. Bact_microcomp_CS.
IPR000249. Microcompartment_bac.
[Graphical view ]
Pfami PF00936. BMC. 1 hit.
[Graphical view ]
SMARTi SM00877. BMC. 1 hit.
[Graphical view ]
PROSITEi PS01139. BACT_MICROCOMP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Ludwig M., Sultemeyer D., Badger M.R., Price G.D.
    Submitted (JUL-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "Complete sequence of Synechococcus sp. PCC 7002."
    Li T., Zhao J., Zhao C., Liu Z., Zhao F., Marquardt J., Nomura C.T., Persson S., Detter J.C., Richardson P.M., Lanz C., Schuster S.C., Wang J., Li S., Huang X., Cai T., Yu Z., Luo J., Zhao J., Bryant D.A.
    Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27264 / PCC 7002 / PR-6.

Entry informationi

Entry nameiCCMK_SYNP2
AccessioniPrimary (citable) accession number: O30709
Secondary accession number(s): B1XQ08
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: June 10, 2008
Last modified: October 29, 2014
This is version 59 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3