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O30709

- CCMK_SYNP2

UniProt

O30709 - CCMK_SYNP2

Protein

Carbon dioxide-concentrating mechanism protein CcmK

Gene

ccmK

Organism
Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 58 (01 Oct 2014)
      Sequence version 2 (10 Jun 2008)
      Previous versions | rss
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    Functioni

    May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered.

    Enzyme and pathway databases

    BioCyciSSP32049:GKF7-1803-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Carbon dioxide-concentrating mechanism protein CcmK
    Alternative name(s):
    Carboxysome shell protein CsoS1
    Gene namesi
    Name:ccmK
    Synonyms:csoS1
    Ordered Locus Names:SYNPCC7002_A1802
    OrganismiSynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)
    Taxonomic identifieri32049 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
    ProteomesiUP000001688: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 112112Carbon dioxide-concentrating mechanism protein CcmKPRO_0000201502Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi32049.SYNPCC7002_A1802.

    Structurei

    3D structure databases

    ProteinModelPortaliO30709.
    SMRiO30709. Positions 2-101.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG4577.
    HOGENOMiHOG000286836.
    KOiK08696.
    OMAiRPHNDIS.
    OrthoDBiEOG6ZH2H4.

    Family and domain databases

    InterProiIPR020808. Bact_microcomp_CS.
    IPR000249. Microcompartment_bac.
    [Graphical view]
    PfamiPF00936. BMC. 1 hit.
    [Graphical view]
    SMARTiSM00877. BMC. 1 hit.
    [Graphical view]
    PROSITEiPS01139. BACT_MICROCOMP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    O30709-1 [UniParc]FASTAAdd to Basket

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    MSIAVGMVET LGFPAVVEAA DAMVKAARVT LVGYEKIGSG RVTVIVRGDV    50
    SEVQASVSAG TDNVSRVNGG QVLSTHIIAR PHENLEYVLP IRYTEAVEQF 100
    RESVNPQPLR RV 112
    Length:112
    Mass (Da):12,033
    Last modified:June 10, 2008 - v2
    Checksum:iAA5606657F41B0AC
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti2 – 21S → P in AAB66835. 1 PublicationCurated
    Sequence conflicti8 – 81V → I in AAB66835. 1 PublicationCurated
    Sequence conflicti11 – 111L → R in AAB66835. 1 PublicationCurated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF015889 Genomic DNA. Translation: AAB66835.1.
    CP000951 Genomic DNA. Translation: ACA99790.1.
    RefSeqiWP_012307413.1. NC_010475.1.
    YP_001735046.1. NC_010475.1.

    Genome annotation databases

    EnsemblBacteriaiACA99790; ACA99790; SYNPCC7002_A1802.
    GeneIDi6056529.
    KEGGisyp:SYNPCC7002_A1802.
    PATRICi23818234. VBISynSp37135_2058.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF015889 Genomic DNA. Translation: AAB66835.1 .
    CP000951 Genomic DNA. Translation: ACA99790.1 .
    RefSeqi WP_012307413.1. NC_010475.1.
    YP_001735046.1. NC_010475.1.

    3D structure databases

    ProteinModelPortali O30709.
    SMRi O30709. Positions 2-101.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 32049.SYNPCC7002_A1802.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACA99790 ; ACA99790 ; SYNPCC7002_A1802 .
    GeneIDi 6056529.
    KEGGi syp:SYNPCC7002_A1802.
    PATRICi 23818234. VBISynSp37135_2058.

    Phylogenomic databases

    eggNOGi COG4577.
    HOGENOMi HOG000286836.
    KOi K08696.
    OMAi RPHNDIS.
    OrthoDBi EOG6ZH2H4.

    Enzyme and pathway databases

    BioCyci SSP32049:GKF7-1803-MONOMER.

    Family and domain databases

    InterProi IPR020808. Bact_microcomp_CS.
    IPR000249. Microcompartment_bac.
    [Graphical view ]
    Pfami PF00936. BMC. 1 hit.
    [Graphical view ]
    SMARTi SM00877. BMC. 1 hit.
    [Graphical view ]
    PROSITEi PS01139. BACT_MICROCOMP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Ludwig M., Sultemeyer D., Badger M.R., Price G.D.
      Submitted (JUL-1997) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "Complete sequence of Synechococcus sp. PCC 7002."
      Li T., Zhao J., Zhao C., Liu Z., Zhao F., Marquardt J., Nomura C.T., Persson S., Detter J.C., Richardson P.M., Lanz C., Schuster S.C., Wang J., Li S., Huang X., Cai T., Yu Z., Luo J., Zhao J., Bryant D.A.
      Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27264 / PCC 7002 / PR-6.

    Entry informationi

    Entry nameiCCMK_SYNP2
    AccessioniPrimary (citable) accession number: O30709
    Secondary accession number(s): B1XQ08
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 15, 1998
    Last sequence update: June 10, 2008
    Last modified: October 1, 2014
    This is version 58 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3