Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

O30709 (CCMK_SYNP2) Reviewed, UniProtKB/Swiss-Prot

Last modified November 13, 2013. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Carbon dioxide-concentrating mechanism protein CcmK
Alternative name(s):
Carboxysome shell protein CsoS1
Gene names
Name:ccmK
Synonyms:csoS1
Ordered Locus Names:SYNPCC7002_A1802
OrganismSynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum) [Complete proteome] [HAMAP]
Taxonomic identifier32049 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus

Protein attributes

Sequence length112 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered.

Sequence similarities

Belongs to the bacterial microcompartments protein family.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 112112Carbon dioxide-concentrating mechanism protein CcmK
PRO_0000201502

Experimental info

Sequence conflict21S → P in AAB66835. Ref.1
Sequence conflict81V → I in AAB66835. Ref.1
Sequence conflict111L → R in AAB66835. Ref.1

Sequences

Sequence LengthMass (Da)Tools
O30709 [UniParc].

Last modified June 10, 2008. Version 2.
Checksum: AA5606657F41B0AC

FASTA11212,033
        10         20         30         40         50         60 
MSIAVGMVET LGFPAVVEAA DAMVKAARVT LVGYEKIGSG RVTVIVRGDV SEVQASVSAG 

        70         80         90        100        110 
TDNVSRVNGG QVLSTHIIAR PHENLEYVLP IRYTEAVEQF RESVNPQPLR RV 

« Hide

References

« Hide 'large scale' references
[1]Ludwig M., Sultemeyer D., Badger M.R., Price G.D.
Submitted (JUL-1997) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Complete sequence of Synechococcus sp. PCC 7002."
Li T., Zhao J., Zhao C., Liu Z., Zhao F., Marquardt J., Nomura C.T., Persson S., Detter J.C., Richardson P.M., Lanz C., Schuster S.C., Wang J., Li S., Huang X., Cai T., Yu Z., Luo J., Zhao J., Bryant D.A.
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27264 / PCC 7002 / PR-6.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF015889 Genomic DNA. Translation: AAB66835.1.
CP000951 Genomic DNA. Translation: ACA99790.1.
RefSeqYP_001735046.1. NC_010475.1.

3D structure databases

ProteinModelPortalO30709.
SMRO30709. Positions 2-101.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING32049.SYNPCC7002_A1802.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACA99790; ACA99790; SYNPCC7002_A1802.
GeneID6056529.
KEGGsyp:SYNPCC7002_A1802.
PATRIC23818234. VBISynSp37135_2058.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4577.
HOGENOMHOG000286836.
KOK08696.
OMASWHIIAR.
OrthoDBEOG6ZH2H4.
ProtClustDBCLSK892529.

Enzyme and pathway databases

BioCycSSP32049:GKF7-1803-MONOMER.

Family and domain databases

InterProIPR020808. Bact_microcomp_CS.
IPR000249. Microcompartment_bac.
[Graphical view]
PfamPF00936. BMC. 1 hit.
[Graphical view]
SMARTSM00877. BMC. 1 hit.
[Graphical view]
PROSITEPS01139. BACT_MICROCOMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameCCMK_SYNP2
AccessionPrimary (citable) accession number: O30709
Secondary accession number(s): B1XQ08
Entry history
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: June 10, 2008
Last modified: November 13, 2013
This is version 55 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families