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Protein

Beta-xylanase

Gene
N/A
Organism
Bacillus sp. NG-27
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi69Magnesium 1; via carbonyl oxygenCombined sources1
Metal bindingi343Magnesium 2Combined sources1
Metal bindingi353Magnesium 1; via carbonyl oxygenCombined sources1
Metal bindingi356Magnesium 1; via carbonyl oxygenCombined sources1
Metal bindingi402Magnesium 2; via carbonyl oxygenCombined sources1
Metal bindingi405Magnesium 2Combined sources1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradation, Xylan degradationImported

Keywords - Ligandi

MagnesiumCombined sources, Metal-bindingCombined sources

Protein family/group databases

CAZyiGH10. Glycoside Hydrolase Family 10.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-xylanaseUniRule annotation (EC:3.2.1.8UniRule annotation)
OrganismiBacillus sp. NG-27Imported
Taxonomic identifieri65673 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 28Sequence analysisAdd BLAST28
ChainiPRO_500415869529 – 405Beta-xylanaseSequence analysisAdd BLAST377

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2F8QX-ray2.20A/B53-405[»]
2FGLX-ray2.20A/B52-405[»]
4QCEX-ray2.32A/B52-405[»]
4QCFX-ray2.26A52-405[»]
4QDMX-ray1.96A/B52-405[»]
ProteinModelPortaliO30700.
SMRiO30700.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO30700.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini56 – 405GH10 (glycosyl hydrolase family 10)InterPro annotationAdd BLAST350

Sequence similaritiesi

Belongs to the glycosyl hydrolase 10 (cellulase F) family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001000. GH10.
IPR031158. GH10_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00591. GH10_1. 1 hit.
PS51760. GH10_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O30700-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLKTLRKPFI AGLALSLLLT GGASSVFAQG NGQAGPPKGG IFKEGEKGNG
60 70 80 90 100
NVQPFAWQVA SLADRYEESF DIGAAVEPHQ LNGRQGKVLK HHYNSIVAEN
110 120 130 140 150
AMKPISLQPE EGVFTWDGAD AIVEFARKNN MNLRFHTLVW HNQVPDWFFL
160 170 180 190 200
DEEGNPMVEE TNEAKRQANK ELLLERLETH IKTVVERYKD DVTAWDVVNE
210 220 230 240 250
VVDDGTPNER GLRESVWYQI TGDEYIRVAF ETARKYAGED AKLFINDYNT
260 270 280 290 300
EVTPKRDHLY NLVQDLLADG VPIDGVGHQA HIQIDWPTID EIRTSMEMFA
310 320 330 340 350
GLGLDNQVTE LDVSLYGWPP RPAFPTYDAI PQERFQAQAD RYNQLFELYE
360 370 380 390 400
ELDADLSSVT FWGIADNHTW LDDRAREYND GVGKDAPFVF DPNYRVKPAF

WRIID
Length:405
Mass (Da):46,021
Last modified:January 1, 1998 - v1
Checksum:iB081CB2FF8BFFCE2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF015445 Genomic DNA. Translation: AAB70918.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF015445 Genomic DNA. Translation: AAB70918.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2F8QX-ray2.20A/B53-405[»]
2FGLX-ray2.20A/B52-405[»]
4QCEX-ray2.32A/B52-405[»]
4QCFX-ray2.26A52-405[»]
4QDMX-ray1.96A/B52-405[»]
ProteinModelPortaliO30700.
SMRiO30700.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH10. Glycoside Hydrolase Family 10.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiO30700.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001000. GH10.
IPR031158. GH10_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00591. GH10_1. 1 hit.
PS51760. GH10_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO30700_9BACI
AccessioniPrimary (citable) accession number: O30700
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: November 30, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.