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O30472

- YODL_BACSU

UniProt

O30472 - YODL_BACSU

Protein

Uncharacterized protein YodL

Gene

yodL

Organism
Bacillus subtilis (strain 168)
Status
Reviewed - Annotation score: 1 out of 5- Protein predictedi
  1. Functioni

    Enzyme and pathway databases

    BioCyciBSUB:BSU19640-MONOMER.

    Protein family/group databases

    TCDBi8.A.42.1.1. 8.a.42. the small hydrophilic yodl domain/protein ((yodl) family.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein YodL
    Gene namesi
    Name:yodL
    Synonyms:yokX
    Ordered Locus Names:BSU19640
    OrganismiBacillus subtilis (strain 168)
    Taxonomic identifieri224308 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
    ProteomesiUP000001570: Chromosome

    Organism-specific databases

    GenoListiBSU19640.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 104104Uncharacterized protein YodLPRO_0000049658Add
    BLAST

    Proteomic databases

    PaxDbiO30472.

    Interactioni

    Protein-protein interaction databases

    STRINGi224308.BSU19640.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG79890.
    HOGENOMiHOG000261912.
    OMAiDVTIFQT.
    OrthoDBiEOG60GRXZ.

    Family and domain databases

    InterProiIPR025923. YodL-like.
    [Graphical view]
    PfamiPF14191. YodL. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    O30472-1 [UniParc]FASTAAdd to Basket

    « Hide

    MMLSVFKKKS CSYDVTIFQT PRFGEKKGYR AVYRTELNGS DHQDVLKRAF    50
    SLFNVFDTVP SDYDARFMAT GDVILIDEGR KGKTYYQLLP AGWRKINRLI 100
    VQTT 104
    Length:104
    Mass (Da):12,055
    Last modified:May 26, 2009 - v3
    Checksum:i59293981BC16E3CA
    GO

    Sequence cautioni

    The sequence AAB72066.1 differs from that shown. Reason: Erroneous initiation.

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti83 – 831K → R in AAB81163. (PubMed:9734814)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF015775 Genomic DNA. Translation: AAB72066.1. Different initiation.
    AF006665 Genomic DNA. Translation: AAB81163.1.
    AL009126 Genomic DNA. Translation: CAB13855.2.
    PIRiG69903.
    RefSeqiNP_389845.2. NC_000964.3.

    Genome annotation databases

    EnsemblBacteriaiCAB13855; CAB13855; BSU19640.
    GeneIDi940030.
    KEGGibsu:BSU19640.
    PATRICi18975783. VBIBacSub10457_2082.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF015775 Genomic DNA. Translation: AAB72066.1 . Different initiation.
    AF006665 Genomic DNA. Translation: AAB81163.1 .
    AL009126 Genomic DNA. Translation: CAB13855.2 .
    PIRi G69903.
    RefSeqi NP_389845.2. NC_000964.3.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 224308.BSU19640.

    Protein family/group databases

    TCDBi 8.A.42.1.1. 8.a.42. the small hydrophilic yodl domain/protein ((yodl) family.

    Proteomic databases

    PaxDbi O30472.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAB13855 ; CAB13855 ; BSU19640 .
    GeneIDi 940030.
    KEGGi bsu:BSU19640.
    PATRICi 18975783. VBIBacSub10457_2082.

    Organism-specific databases

    GenoListi BSU19640.

    Phylogenomic databases

    eggNOGi NOG79890.
    HOGENOMi HOG000261912.
    OMAi DVTIFQT.
    OrthoDBi EOG60GRXZ.

    Enzyme and pathway databases

    BioCyci BSUB:BSU19640-MONOMER.

    Family and domain databases

    InterProi IPR025923. YodL-like.
    [Graphical view ]
    Pfami PF14191. YodL. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence analysis of the Bacillus subtilis 168 chromosome region between the sspC and odhA loci (184 degrees-180 degrees)."
      Ghim S.-Y., Choi S.-K., Shin B.-S., Jeong Y.-M., Sorokin A., Ehrlich S.D., Park S.-H.
      DNA Res. 5:195-201(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: 168.
    2. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
      Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
      , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
      Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 168.

    Entry informationi

    Entry nameiYODL_BACSU
    AccessioniPrimary (citable) accession number: O30472
    Secondary accession number(s): O34372
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 25, 2003
    Last sequence update: May 26, 2009
    Last modified: October 1, 2014
    This is version 64 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Bacillus subtilis
      Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

    External Data

    Dasty 3