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O30472 (YODL_BACSU) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 63. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein YodL
Gene names
Name:yodL
Synonyms:yokX
Ordered Locus Names:BSU19640
OrganismBacillus subtilis (strain 168) [Reference proteome] [HAMAP]
Taxonomic identifier224308 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length104 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence caution

The sequence AAB72066.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 104104Uncharacterized protein YodL
PRO_0000049658

Experimental info

Sequence conflict831K → R in AAB81163. Ref.1

Sequences

Sequence LengthMass (Da)Tools
O30472 [UniParc].

Last modified May 26, 2009. Version 3.
Checksum: 59293981BC16E3CA

FASTA10412,055
        10         20         30         40         50         60 
MMLSVFKKKS CSYDVTIFQT PRFGEKKGYR AVYRTELNGS DHQDVLKRAF SLFNVFDTVP 

        70         80         90        100 
SDYDARFMAT GDVILIDEGR KGKTYYQLLP AGWRKINRLI VQTT 

« Hide

References

« Hide 'large scale' references
[1]"Sequence analysis of the Bacillus subtilis 168 chromosome region between the sspC and odhA loci (184 degrees-180 degrees)."
Ghim S.-Y., Choi S.-K., Shin B.-S., Jeong Y.-M., Sorokin A., Ehrlich S.D., Park S.-H.
DNA Res. 5:195-201(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: 168.
[2]"The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V. expand/collapse author list , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 168.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF015775 Genomic DNA. Translation: AAB72066.1. Different initiation.
AF006665 Genomic DNA. Translation: AAB81163.1.
AL009126 Genomic DNA. Translation: CAB13855.2.
PIRG69903.
RefSeqNP_389845.2. NC_000964.3.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING224308.BSU19640.

Protein family/group databases

TCDB8.A.42.1.1. 8.a.42. the small hydrophilic yodl domain/protein ((yodl) family.

Proteomic databases

PaxDbO30472.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAB13855; CAB13855; BSU19640.
GeneID940030.
KEGGbsu:BSU19640.
PATRIC18975783. VBIBacSub10457_2082.

Organism-specific databases

GenoListBSU19640.

Phylogenomic databases

eggNOGNOG79890.
HOGENOMHOG000261912.
OMADVTIFQT.
OrthoDBEOG60GRXZ.

Enzyme and pathway databases

BioCycBSUB:BSU19640-MONOMER.

Family and domain databases

InterProIPR025923. YodL-like.
[Graphical view]
PfamPF14191. YodL. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameYODL_BACSU
AccessionPrimary (citable) accession number: O30472
Secondary accession number(s): O34372
Entry history
Integrated into UniProtKB/Swiss-Prot: July 25, 2003
Last sequence update: May 26, 2009
Last modified: May 14, 2014
This is version 63 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Bacillus subtilis

Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList