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O30472

- YODL_BACSU

UniProt

O30472 - YODL_BACSU

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Protein
Uncharacterized protein YodL
Gene
yodL, yokX, BSU19640
Organism
Bacillus subtilis (strain 168)
Status
Reviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciBSUB:BSU19640-MONOMER.

Protein family/group databases

TCDBi8.A.42.1.1. 8.a.42. the small hydrophilic yodl domain/protein ((yodl) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YodL
Gene namesi
Name:yodL
Synonyms:yokX
Ordered Locus Names:BSU19640
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001570: Chromosome

Organism-specific databases

GenoListiBSU19640.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 104104Uncharacterized protein YodL
PRO_0000049658Add
BLAST

Proteomic databases

PaxDbiO30472.

Interactioni

Protein-protein interaction databases

STRINGi224308.BSU19640.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG79890.
HOGENOMiHOG000261912.
OMAiDVTIFQT.
OrthoDBiEOG60GRXZ.

Family and domain databases

InterProiIPR025923. YodL-like.
[Graphical view]
PfamiPF14191. YodL. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O30472-1 [UniParc]FASTAAdd to Basket

« Hide

MMLSVFKKKS CSYDVTIFQT PRFGEKKGYR AVYRTELNGS DHQDVLKRAF    50
SLFNVFDTVP SDYDARFMAT GDVILIDEGR KGKTYYQLLP AGWRKINRLI 100
VQTT 104
Length:104
Mass (Da):12,055
Last modified:May 26, 2009 - v3
Checksum:i59293981BC16E3CA
GO

Sequence cautioni

The sequence AAB72066.1 differs from that shown. Reason: Erroneous initiation.

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti83 – 831K → R in AAB81163. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF015775 Genomic DNA. Translation: AAB72066.1. Different initiation.
AF006665 Genomic DNA. Translation: AAB81163.1.
AL009126 Genomic DNA. Translation: CAB13855.2.
PIRiG69903.
RefSeqiNP_389845.2. NC_000964.3.

Genome annotation databases

EnsemblBacteriaiCAB13855; CAB13855; BSU19640.
GeneIDi940030.
KEGGibsu:BSU19640.
PATRICi18975783. VBIBacSub10457_2082.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF015775 Genomic DNA. Translation: AAB72066.1 . Different initiation.
AF006665 Genomic DNA. Translation: AAB81163.1 .
AL009126 Genomic DNA. Translation: CAB13855.2 .
PIRi G69903.
RefSeqi NP_389845.2. NC_000964.3.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 224308.BSU19640.

Protein family/group databases

TCDBi 8.A.42.1.1. 8.a.42. the small hydrophilic yodl domain/protein ((yodl) family.

Proteomic databases

PaxDbi O30472.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAB13855 ; CAB13855 ; BSU19640 .
GeneIDi 940030.
KEGGi bsu:BSU19640.
PATRICi 18975783. VBIBacSub10457_2082.

Organism-specific databases

GenoListi BSU19640.

Phylogenomic databases

eggNOGi NOG79890.
HOGENOMi HOG000261912.
OMAi DVTIFQT.
OrthoDBi EOG60GRXZ.

Enzyme and pathway databases

BioCyci BSUB:BSU19640-MONOMER.

Family and domain databases

InterProi IPR025923. YodL-like.
[Graphical view ]
Pfami PF14191. YodL. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence analysis of the Bacillus subtilis 168 chromosome region between the sspC and odhA loci (184 degrees-180 degrees)."
    Ghim S.-Y., Choi S.-K., Shin B.-S., Jeong Y.-M., Sorokin A., Ehrlich S.D., Park S.-H.
    DNA Res. 5:195-201(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168.
  2. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.

Entry informationi

Entry nameiYODL_BACSU
AccessioniPrimary (citable) accession number: O30472
Secondary accession number(s): O34372
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 25, 2003
Last sequence update: May 26, 2009
Last modified: May 14, 2014
This is version 63 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

External Data

Dasty 3

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