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Protein

Beta-xylanase

Gene

XynI

Organism
Caldicellulosiruptor saccharolyticus (Caldocellum saccharolyticum)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradation, Xylan degradationImported

Protein family/group databases

CAZyiCBM22. Carbohydrate-Binding Module Family 22.
GH10. Glycoside Hydrolase Family 10.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-xylanaseUniRule annotation (EC:3.2.1.8UniRule annotation)
Gene namesi
Name:XynIImported
OrganismiCaldicellulosiruptor saccharolyticus (Caldocellum saccharolyticum)Imported
Taxonomic identifieri44001 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacterales Family III. Incertae SedisCaldicellulosiruptor

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 35Sequence analysisAdd BLAST35
ChainiPRO_500415809936 – 690Beta-xylanaseSequence analysisAdd BLAST655

Interactioni

Protein-protein interaction databases

STRINGi351627.Csac_0696.

Structurei

3D structure databases

ProteinModelPortaliO30421.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini352 – 681GH10 (glycosyl hydrolase family 10)InterPro annotationAdd BLAST330

Sequence similaritiesi

Belongs to the glycosyl hydrolase 10 (cellulase F) family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4108FV7. Bacteria.
COG3693. LUCA.

Family and domain databases

Gene3Di2.60.120.260. 2 hits.
3.20.20.80. 1 hit.
InterProiIPR003305. CenC_carb-bd.
IPR008979. Galactose-bd-like.
IPR001000. GH10.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF02018. CBM_4_9. 2 hits.
PF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 2 hits.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51760. GH10_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O30421-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVVRRLKSRK LGFILALLFV ISSIVPLKFI TYSSAEQASS KKKYIEYNFE
60 70 80 90 100
GKSVSPLVKY PSSVTLKITN SARAEGLYSV LVSGRKNVSD GVVVDITKLL
110 120 130 140 150
DFSREYEISF YAMQATKKLQ RISATLEILD SSGKNQLIVA EKVLLPNIWT
160 170 180 190 200
KVSGKIQAYN YKKAKKINLI VNMPTSKSDS FYIDLLVIKD LENAYVLKQE
210 220 230 240 250
NFENKNTGGF LPEDKNCKIA LTKDKAYSST YSLKVPAILK RARMERFLFP
260 270 280 290 300
IKGLLQKGRT YDFSVLVYQN SSKPVSFLAG IKINDGKSTK EIVLTKQSVT
310 320 330 340 350
PKKWAELFAT LDLDTKFSAK DVSFFVKPAV AIPYYIDLYS ISDENWGQPI
360 370 380 390 400
PDYNLPSLCE KYKNYFKIGV AVPYRALTNP VDVEVIKRHF NSITPENEMK
410 420 430 440 450
PESLQPYEGS FDFNIADEYI DFCKKNNISL RGHTLVWHQQ TPSWFFTNPE
460 470 480 490 500
TGEKLTNSEK DRKILLDRLK KHIQTVVGRY KGKVYAWDVV NEAIDENQPD
510 520 530 540 550
GYREATGTIS LGPRVHWKAF IWAHEADPKA KLFYNDYSTG NPYKREFIYK
560 570 580 590 600
LIKNLKAKGV PIHGVGLQCH ISLDWPDVSE IEETIKLFSK IPGLEIHFTA
610 620 630 640 650
IDISIAKNMI EGDDAYTRYL LIGQAKKLKA IFDVLKKYKN VVTGVTFWGL
660 670 680 690
KDDYSWLKGD LPLLFDKDYQ PKFAFWSLID PSVVPPKLKN
Length:690
Mass (Da):78,768
Last modified:January 1, 1998 - v1
Checksum:iA5C2D2B441A14FB7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF005382 Genomic DNA. Translation: AAB87379.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF005382 Genomic DNA. Translation: AAB87379.1.

3D structure databases

ProteinModelPortaliO30421.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi351627.Csac_0696.

Protein family/group databases

CAZyiCBM22. Carbohydrate-Binding Module Family 22.
GH10. Glycoside Hydrolase Family 10.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG4108FV7. Bacteria.
COG3693. LUCA.

Family and domain databases

Gene3Di2.60.120.260. 2 hits.
3.20.20.80. 1 hit.
InterProiIPR003305. CenC_carb-bd.
IPR008979. Galactose-bd-like.
IPR001000. GH10.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF02018. CBM_4_9. 2 hits.
PF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 2 hits.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51760. GH10_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO30421_CALSA
AccessioniPrimary (citable) accession number: O30421
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: April 13, 2016
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.