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Protein

Tat proofreading chaperone TtrD

Gene

ttrD

Organism
Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Binds specifically to the Tat signal peptide of the TtrA subunit of the tetrathionate reductase.1 Publication

Keywords - Molecular functioni

Chaperone

Names & Taxonomyi

Protein namesi
Recommended name:
Tat proofreading chaperone TtrD
Gene namesi
Name:ttrD
Ordered Locus Names:AF_0160
OrganismiArchaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
Taxonomic identifieri224325 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaArchaeoglobiArchaeoglobalesArchaeoglobaceaeArchaeoglobus
Proteomesi
  • UP000002199 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004174211 – 174Tat proofreading chaperone TtrDAdd BLAST174

Interactioni

Subunit structurei

Monomer.1 Publication

Protein-protein interaction databases

STRINGi224325.AF0160.

Structurei

Secondary structure

1174
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi1 – 20Combined sources20
Helixi27 – 34Combined sources8
Helixi45 – 49Combined sources5
Helixi53 – 56Combined sources4
Helixi62 – 64Combined sources3
Helixi65 – 78Combined sources14
Helixi91 – 110Combined sources20
Helixi114 – 130Combined sources17
Helixi132 – 137Combined sources6
Helixi143 – 164Combined sources22

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2IDGX-ray2.69A/B/C1-174[»]
2XOLX-ray1.35A/B1-174[»]
2Y6YX-ray2.20A1-174[»]
2YJMX-ray1.84A1-174[»]
ProteinModelPortaliO30077.
SMRiO30077.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO30077.

Family & Domainsi

Sequence similaritiesi

Belongs to the TorD/DmsD family.Curated

Phylogenomic databases

eggNOGiarCOG01507. Archaea.
COG4904. LUCA.

Family and domain databases

Gene3Di1.10.3480.10. 1 hit.
InterProiIPR020945. DMSO/NO3_reduct_chaperone.
[Graphical view]
PfamiPF02613. Nitrate_red_del. 1 hit.
[Graphical view]
SUPFAMiSSF89155. SSF89155. 1 hit.

Sequencei

Sequence statusi: Complete.

O30077-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTIGRAKVYA TLSKIFYHLF YDEAIPKDCR EIIEKFGEID FNLRSVLVRE
60 70 80 90 100
LRGSVLIKDM PQSLAEVYES VMKDFYERYG FQASELHADH IAVELAFMSK
110 120 130 140 150
LVEREISLAQ QMKEEELYKI RAAQHRFIKA HLQPLVKNLP SAPLLNFVRD
160 170
FVREDAKYLY SSLVGEKNEG ADNN
Length:174
Mass (Da):20,239
Last modified:January 1, 1998 - v1
Checksum:i798770D810AEBE76
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000782 Genomic DNA. Translation: AAB91075.1.
PIRiH69269.
RefSeqiWP_010877672.1. NC_000917.1.

Genome annotation databases

EnsemblBacteriaiAAB91075; AAB91075; AF_0160.
GeneIDi1483371.
KEGGiafu:AF_0160.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000782 Genomic DNA. Translation: AAB91075.1.
PIRiH69269.
RefSeqiWP_010877672.1. NC_000917.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2IDGX-ray2.69A/B/C1-174[»]
2XOLX-ray1.35A/B1-174[»]
2Y6YX-ray2.20A1-174[»]
2YJMX-ray1.84A1-174[»]
ProteinModelPortaliO30077.
SMRiO30077.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224325.AF0160.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAB91075; AAB91075; AF_0160.
GeneIDi1483371.
KEGGiafu:AF_0160.

Phylogenomic databases

eggNOGiarCOG01507. Archaea.
COG4904. LUCA.

Miscellaneous databases

EvolutionaryTraceiO30077.

Family and domain databases

Gene3Di1.10.3480.10. 1 hit.
InterProiIPR020945. DMSO/NO3_reduct_chaperone.
[Graphical view]
PfamiPF02613. Nitrate_red_del. 1 hit.
[Graphical view]
SUPFAMiSSF89155. SSF89155. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiTTRD_ARCFU
AccessioniPrimary (citable) accession number: O30077
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 16, 2012
Last sequence update: January 1, 1998
Last modified: November 2, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.