O29575 (O29575_ARCFU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Succinate dehydrogenase, iron-sulfur subunit B (SdhB) EMBL AAB90556.1

Gene names

Ordered Locus Names:

AF_0682

Organism

Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)

Taxonomic identifier

224325 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Archaeoglobi › Archaeoglobales › Archaeoglobaceae › Archaeoglobus

Protein attributes

Sequence length	236 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 2Fe-2S ferredoxin-type domain. RuleBase RU000392

Ontologies

Keywords
Ligand	2Fe-2S RuleBase RU000392 4Fe-4S RuleBase RU003429 Iron Iron-sulfur Metal-binding
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular function	2 iron, 2 sulfur cluster binding Inferred from electronic annotation. Source: UniProtKB-KW 4 iron, 4 sulfur cluster binding Inferred from electronic annotation. Source: UniProtKB-KW electron carrier activity Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW oxidoreductase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O29575 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: 266B72252CC913EA	FASTA	236	26,644
	10 20 30 40 50 60 MVEFRIRRFD GTKAYWQSFE VPAKRGMTVL EALYYIKENL DSSLAFRASC RMGICGSCAM 70 80 90 100 110 120 KINDKPRLAC ETQVLTLGNA VKVEPLDNFK VIKDLITEFD GFFAKHKAVK PYLIRKDDNY 130 140 150 160 170 180 AEPKELLQTP EELNEYYVFT LCIKCGACYS VCPAAATLDG YLGPAAMTAA YRFCADSRDD 190 200 210 220 230 GQRERYEIAS SSNGVWRCHL AMECSEVCPK NVEPAKAVQM LRKKTAFSIL KSLLGW

References

[1]

"The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus." Klenk H.-P., Clayton R.A., Tomb J.-F., White O., Nelson K.E., Ketchum K.A., Dodson R.J., Gwinn M.L., Hickey E.K., Peterson J.D., Richardson D.L., Kerlavage A.R., Graham D.E., Kyrpides N.C., Fleischmann R.D., Quackenbush J., Lee N.H., Sutton G.G. , Gill S.R., Kirkness E.F., Dougherty B.A., McKenney K., Adams M.D., Loftus B.J., Peterson S.N., Reich C.I., McNeil L.K., Badger J.H., Glodek A., Zhou L., Overbeek R., Gocayne J.D., Weidman J.F., McDonald L.A., Utterback T.R., Cotton M.D., Spriggs T., Artiach P., Kaine B.P., Sykes S.M., Sadow P.W., D'Andrea K.P., Bowman C., Fujii C., Garland S.A., Mason T.M., Olsen G.J., Fraser C.M., Smith H.O., Woese C.R., Venter J.C. Nature 390:364-370(1997) [PubMed: 9389475] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE000782 Genomic DNA. Translation: AAB90556.1.
PIR	B69335.
RefSeq	NP_069516.1. NC_000917.1.
3D structure databases
HSSP	HSSP built from PDB template 1KF6 based on UniProtKB P00364.
ProteinModelPortal	O29575.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1483900.
GenomeReviews	Gene locus AF_0682 in contig AE000782_GR.
KEGG	afu:AF0682.
NMPDR	fig|224325.1.peg.675.
TIGR	AF_0682.
Phylogenomic databases
HOGENOM	HBG616382.
OMA	DAMFVNG.
PhylomeDB	O29575.
ProtClustDB	PRK05950.
Family and domain databases
InterPro	IPR006058. 2Fe2S_fd_BS. IPR001450. 4Fe4S-bd_dom. IPR017896. 4Fe4S_Fe-S-bd. IPR017900. 4Fe4S_Fe_S_CS. IPR012675. Beta-grasp_ferredoxin-type. IPR001041. Ferredoxin. IPR012285. Fum_reductase_C. IPR009051. Helical_ferredxn. IPR004489. Succ_DH/fum_Rdtase_Fe-S. [Graphical view]
Gene3D	G3DSA:3.10.20.30. Ferredoxin_fold. 1 hit. G3DSA:1.10.1060.10. Fum_reductase_C. 1 hit.
KO	K00240.
Pfam	PF00111. Fer2. 1 hit. PF00037. Fer4. 1 hit. [Graphical view]
SUPFAM	SSF54292. Ferredoxin. 1 hit. SSF46548. Helical_ferredxn. 1 hit.
TIGRFAMs	TIGR00384. DhsB. 1 hit.
PROSITE	PS00197. 2FE2S_FER_1. 1 hit. PS51085. 2FE2S_FER_2. 1 hit. PS00198. 4FE4S_FER_1. 1 hit. PS51379. 4FE4S_FER_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

O29575_ARCFU

Accession

Primary (citable) accession number: O29575

Entry history

Integrated into UniProtKB/TrEMBL:	January 1, 1998
Last sequence update:	January 1, 1998
Last modified:	December 14, 2011
This is version 80 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)