O29102 (VATF_ARCFU) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
V-type ATP synthase subunit F

Alternative name(s):
V-ATPase subunit F

Gene names

Name:	atpF
Ordered Locus Names:	AF_1165

Organism

Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)

Taxonomic identifier

224325 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Archaeoglobi › Archaeoglobales › Archaeoglobaceae › Archaeoglobus

Protein attributes

Sequence length	101 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Function	Produces ATP from ADP in the presence of a proton gradient across the membrane. HAMAP MF_00312
Sequence similarities	Belongs to the V-ATPase F subunit family.

Ontologies

Keywords
Biological process	ATP synthesis Hydrogen ion transport Ion transport Transport
Technical term	3D-structure Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	ATP biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW ATP hydrolysis coupled proton transport Inferred from electronic annotation. Source: InterPro
Cellular component	proton-transporting two-sector ATPase complex, catalytic domain Inferred from electronic annotation. Source: InterPro
Molecular function	hydrogen ion transporting ATP synthase activity, rotational mechanism Inferred from electronic annotation. Source: InterPro proton-transporting ATPase activity, rotational mechanism Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

1 – 101

101

V-type ATP synthase subunit F HAMAP MF_00312

PRO_0000144813

Secondary structure

1

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101

Helix Strand Turn

Details...

Beta strand

4 – 8

5

Helix

10 – 18

9

Beta strand

24 – 26

3

Helix

30 – 42

13

Beta strand

44 – 52

9

Helix

53 – 55

3

Helix

61 – 64

4

Turn

65 – 69

5

Beta strand

72 – 78

7

Sequences

	Sequence		Length	Mass (Da)
	O29102 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: D95EAE0D8BA8DB3D	FASTA	101	11,272
	10 20 30 40 50 60 MKKLAVVGDP DFTIGFMLAG ISDIYEVTSD EEIVKAVEDV LKRDDVGVVI IKQEYLKKLP 70 80 90 100 PVLRREIDEK VEPTFVSVGG TGGVEEIREK IRKAIGVDLW K

References

[1]

"The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus." Klenk H.-P., Clayton R.A., Tomb J.-F., White O., Nelson K.E., Ketchum K.A., Dodson R.J., Gwinn M.L., Hickey E.K., Peterson J.D., Richardson D.L., Kerlavage A.R., Graham D.E., Kyrpides N.C., Fleischmann R.D., Quackenbush J., Lee N.H., Sutton G.G. , Gill S.R., Kirkness E.F., Dougherty B.A., McKenney K., Adams M.D., Loftus B.J., Peterson S.N., Reich C.I., McNeil L.K., Badger J.H., Glodek A., Zhou L., Overbeek R., Gocayne J.D., Weidman J.F., McDonald L.A., Utterback T.R., Cotton M.D., Spriggs T., Artiach P., Kaine B.P., Sykes S.M., Sadow P.W., D'Andrea K.P., Bowman C., Fujii C., Garland S.A., Mason T.M., Olsen G.J., Fraser C.M., Smith H.O., Woese C.R., Venter J.C. Nature 390:364-370(1997) [PubMed: 9389475] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AE000782 Genomic DNA. Translation: AAB90080.1.

PIR

D69395.

RefSeq

NP_069994.1. NC_000917.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2I4R	X-ray	2.80	A/B	4-94	[»]

ProteinModelPortal

O29102.

SMR

O29102. Positions 4-79.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

1484389.

GenomeReviews

Gene locus AF_1165 in contig AE000782_GR.

KEGG

afu:AF1165.

NMPDR

fig|224325.1.peg.1154.

TIGR

AF_1165.

Phylogenomic databases

HOGENOM

HBG402579.

OMA

VGVDLWK.

ProtClustDB

PRK02228.

Enzyme and pathway databases

BioCyc

AFUL224325:AF_1165-MONOMER.

Family and domain databases

HAMAP

MF_00312. ATP_synth_F_arch.
[Tree]

InterPro

IPR022944. ATPase_V1-cplx_fsu_bac/arc.
IPR008218. ATPase_V1/A1-cplx_fsu.
[Graphical view]

KO

K02122.

Pfam

PF01990. ATP-synt_F. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

VATF_ARCFU

Accession

Primary (citable) accession number: O29102

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 24, 2001
Last sequence update:	January 1, 1998
Last modified:	November 16, 2011
This is version 79 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program