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Protein

Cell division cycle protein 48 homolog AF_1297

Gene

AF_1297

Organism
Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi223 – 230ATPSequence analysis8
Nucleotide bindingi496 – 503ATPSequence analysis8

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Cell division cycle protein 48 homolog AF_1297
Gene namesi
Ordered Locus Names:AF_1297
OrganismiArchaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
Taxonomic identifieri224325 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaArchaeoglobiArchaeoglobalesArchaeoglobaceaeArchaeoglobus
Proteomesi
  • UP000002199 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000845901 – 733Cell division cycle protein 48 homolog AF_1297Add BLAST733

Proteomic databases

PRIDEiO28972.

Interactioni

Protein-protein interaction databases

STRINGi224325.AF1297.

Structurei

3D structure databases

ProteinModelPortaliO28972.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the AAA ATPase family. CDC48 subfamily.Curated

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiarCOG01308. Archaea.
COG0464. LUCA.
KOiK13525.
OMAiWPLDYPE.

Family and domain databases

Gene3Di3.10.330.10. 1 hit.
3.40.50.300. 2 hits.
InterProiIPR003593. AAA+_ATPase.
IPR005938. AAA_ATPase_CDC48.
IPR009010. Asp_de-COase-like_dom.
IPR003959. ATPase_AAA_core.
IPR003960. ATPase_AAA_CS.
IPR004201. Cdc48_dom2.
IPR029067. CDC48_domain_2-like.
IPR003338. CDC4_N-term_subdom.
IPR027417. P-loop_NTPase.
IPR015415. Vps4_C.
[Graphical view]
PfamiPF00004. AAA. 2 hits.
PF02933. CDC48_2. 1 hit.
PF02359. CDC48_N. 1 hit.
PF09336. Vps4_C. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 2 hits.
SM01072. CDC48_2. 1 hit.
SM01073. CDC48_N. 1 hit.
[Graphical view]
SUPFAMiSSF50692. SSF50692. 1 hit.
SSF52540. SSF52540. 2 hits.
SSF54585. SSF54585. 1 hit.
TIGRFAMsiTIGR01243. CDC48. 1 hit.
PROSITEiPS00674. AAA. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O28972-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDKKGEEIT LRVAEAFYRD VGRGVARIDP AVMEKYGLQS GDIIEIIGKS
60 70 80 90 100
TVPAIVWPSY PEDRGTGIIR IDGSIRSNAG VGIDDKVRIR KVTAKPAEKV
110 120 130 140 150
TLAPTEPVRL MGGEAYLLRL LEGRPVIKGQ KIRVEVFGHT LTFVITATRP
160 170 180 190 200
SGVVVVTRNT AIELKEKPAE EVKRAVPDVT YEDIGGLKRE LRLVREMIEL
210 220 230 240 250
PLKHPELFQR LGIEPPKGVL LYGPPGTGKT LIAKAVANEV DAHFIPISGP
260 270 280 290 300
EIMSKYYGES EQRLREIFEE AKENAPSIIF IDEIDSIAPK REEVTGEVER
310 320 330 340 350
RVVAQLLALM DGLEARGDVI VIAATNRPDA IDPALRRPGR FDREIEIGVP
360 370 380 390 400
DKEGRKEILE IHTRKMPLAE DVDLEELAEL TNGFVGADLE ALCKEAAMHA
410 420 430 440 450
LRRVLPEIDI EAEEIPAEVI ENLKVTREDF MEALKNIEPS AMREVLVEVP
460 470 480 490 500
NVKWEDIGGL EHAKQELMEA VEWPLKYPEV FRAANIKPPR GILLFGPPGT
510 520 530 540 550
GKTLLAKAVA NESNANFISV KGPELLSKWV GESEKHVREM FRKARQVAPC
560 570 580 590 600
VIFFDEIDSL APRRGGIGDS HVTERVVSQL LTELDGLEEL KDVVVIAATN
610 620 630 640 650
RPDMIDPALL RPGRLERHIY IPPPDKKARV EIFKIHLRGK PLADDVNIEE
660 670 680 690 700
LAEKTEGYSG ADIEAVCREA GMLAIRELIK PGMTREEAKE AAKKLKITKK
710 720 730
HFEEALKKVR PSLTKEDVEK YEKLIEDFHR MYA
Length:733
Mass (Da):81,792
Last modified:January 1, 1998 - v1
Checksum:iAB7F5051B3241FDC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000782 Genomic DNA. Translation: AAB89948.1.
PIRiH69411.
RefSeqiWP_010878793.1. NC_000917.1.

Genome annotation databases

EnsemblBacteriaiAAB89948; AAB89948; AF_1297.
GeneIDi24794911.
KEGGiafu:AF_1297.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000782 Genomic DNA. Translation: AAB89948.1.
PIRiH69411.
RefSeqiWP_010878793.1. NC_000917.1.

3D structure databases

ProteinModelPortaliO28972.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224325.AF1297.

Proteomic databases

PRIDEiO28972.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAB89948; AAB89948; AF_1297.
GeneIDi24794911.
KEGGiafu:AF_1297.

Phylogenomic databases

eggNOGiarCOG01308. Archaea.
COG0464. LUCA.
KOiK13525.
OMAiWPLDYPE.

Family and domain databases

Gene3Di3.10.330.10. 1 hit.
3.40.50.300. 2 hits.
InterProiIPR003593. AAA+_ATPase.
IPR005938. AAA_ATPase_CDC48.
IPR009010. Asp_de-COase-like_dom.
IPR003959. ATPase_AAA_core.
IPR003960. ATPase_AAA_CS.
IPR004201. Cdc48_dom2.
IPR029067. CDC48_domain_2-like.
IPR003338. CDC4_N-term_subdom.
IPR027417. P-loop_NTPase.
IPR015415. Vps4_C.
[Graphical view]
PfamiPF00004. AAA. 2 hits.
PF02933. CDC48_2. 1 hit.
PF02359. CDC48_N. 1 hit.
PF09336. Vps4_C. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 2 hits.
SM01072. CDC48_2. 1 hit.
SM01073. CDC48_N. 1 hit.
[Graphical view]
SUPFAMiSSF50692. SSF50692. 1 hit.
SSF52540. SSF52540. 2 hits.
SSF54585. SSF54585. 1 hit.
TIGRFAMsiTIGR01243. CDC48. 1 hit.
PROSITEiPS00674. AAA. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiY1297_ARCFU
AccessioniPrimary (citable) accession number: O28972
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 2, 2004
Last sequence update: January 1, 1998
Last modified: November 2, 2016
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.