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O28856

- RISC_ARCFU

UniProt

O28856 - RISC_ARCFU

Protein

Riboflavin synthase

Gene

ribC

Organism
Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 84 (01 Oct 2014)
      Sequence version 1 (01 Jan 1998)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    2 6,7-dimethyl-8-(1-D-ribityl)lumazine = riboflavin + 4-(1-D-ribitylamino)-5-amino-2,6-dihydroxypyrimidine.

    Pathwayi

    GO - Molecular functioni

    1. riboflavin synthase activity Source: UniProtKB-EC

    GO - Biological processi

    1. riboflavin biosynthetic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    Transferase

    Keywords - Biological processi

    Riboflavin biosynthesis

    Enzyme and pathway databases

    BioCyciAFUL224325:GJBC-1447-MONOMER.
    UniPathwayiUPA00275; UER00405.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Riboflavin synthase (EC:2.5.1.9)
    Gene namesi
    Name:ribC
    Ordered Locus Names:AF_1416
    OrganismiArchaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
    Taxonomic identifieri224325 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaArchaeoglobiArchaeoglobalesArchaeoglobaceaeArchaeoglobus
    ProteomesiUP000002199: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. riboflavin synthase complex Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 153153Riboflavin synthasePRO_0000134859Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi224325.AF1416.

    Structurei

    3D structure databases

    ProteinModelPortaliO28856.
    SMRiO28856. Positions 2-140.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the DMRL synthase family.Curated

    Phylogenomic databases

    eggNOGiCOG1731.
    KOiK00793.
    OMAiGIVDTTF.

    Family and domain databases

    Gene3Di3.40.50.960. 1 hit.
    InterProiIPR002180. DMRL_synthase.
    IPR006399. Ribfl_synth_arc.
    [Graphical view]
    PfamiPF00885. DMRL_synthase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF015750. Ribfl_synth_arc. 1 hit.
    SUPFAMiSSF52121. SSF52121. 1 hit.
    TIGRFAMsiTIGR01506. ribC_arch. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    O28856-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKIGIADTTF SRINMGKIAI DELRKISSIP YERYTVPGIK DLPIAAKKLL    50
    EEKGCDIVIT LGWVGGTQKD MLSYIVLSMG LVIVQLMTNK HVIDVTIHED 100
    EAEDEKTLMM VAENRVREHV RNAVDLLVNP KRLQKLAGTG QRQGYPDVGP 150
    ILK 153
    Length:153
    Mass (Da):17,083
    Last modified:January 1, 1998 - v1
    Checksum:iC64E3D55752A9F37
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE000782 Genomic DNA. Translation: AAB89831.1.
    PIRiG69426.
    RefSeqiNP_070245.1. NC_000917.1.
    WP_010878913.1. NC_000917.1.

    Genome annotation databases

    EnsemblBacteriaiAAB89831; AAB89831; AF_1416.
    GeneIDi1484640.
    KEGGiafu:AF1416.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE000782 Genomic DNA. Translation: AAB89831.1 .
    PIRi G69426.
    RefSeqi NP_070245.1. NC_000917.1.
    WP_010878913.1. NC_000917.1.

    3D structure databases

    ProteinModelPortali O28856.
    SMRi O28856. Positions 2-140.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 224325.AF1416.

    Protocols and materials databases

    DNASUi 1484640.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB89831 ; AAB89831 ; AF_1416 .
    GeneIDi 1484640.
    KEGGi afu:AF1416.

    Phylogenomic databases

    eggNOGi COG1731.
    KOi K00793.
    OMAi GIVDTTF.

    Enzyme and pathway databases

    UniPathwayi UPA00275 ; UER00405 .
    BioCyci AFUL224325:GJBC-1447-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.960. 1 hit.
    InterProi IPR002180. DMRL_synthase.
    IPR006399. Ribfl_synth_arc.
    [Graphical view ]
    Pfami PF00885. DMRL_synthase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF015750. Ribfl_synth_arc. 1 hit.
    SUPFAMi SSF52121. SSF52121. 1 hit.
    TIGRFAMsi TIGR01506. ribC_arch. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus."
      Klenk H.-P., Clayton R.A., Tomb J.-F., White O., Nelson K.E., Ketchum K.A., Dodson R.J., Gwinn M.L., Hickey E.K., Peterson J.D., Richardson D.L., Kerlavage A.R., Graham D.E., Kyrpides N.C., Fleischmann R.D., Quackenbush J., Lee N.H., Sutton G.G.
      , Gill S.R., Kirkness E.F., Dougherty B.A., McKenney K., Adams M.D., Loftus B.J., Peterson S.N., Reich C.I., McNeil L.K., Badger J.H., Glodek A., Zhou L., Overbeek R., Gocayne J.D., Weidman J.F., McDonald L.A., Utterback T.R., Cotton M.D., Spriggs T., Artiach P., Kaine B.P., Sykes S.M., Sadow P.W., D'Andrea K.P., Bowman C., Fujii C., Garland S.A., Mason T.M., Olsen G.J., Fraser C.M., Smith H.O., Woese C.R., Venter J.C.
      Nature 390:364-370(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126.

    Entry informationi

    Entry nameiRISC_ARCFU
    AccessioniPrimary (citable) accession number: O28856
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 1, 2000
    Last sequence update: January 1, 1998
    Last modified: October 1, 2014
    This is version 84 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3