O28549 (O28549_ARCFU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA ligase, putative EMBL AAB89526.1

Gene names

Ordered Locus Names:

AF_1725

Organism

Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) [Reference proteome] [HAMAP] EMBL AAB89526.1

Taxonomic identifier

224325 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Archaeoglobi › Archaeoglobales › Archaeoglobaceae › Archaeoglobus › Archaeoglobus fulgidus

Protein attributes

Sequence length	313 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AAB89526.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O28549 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: 32F223CDD2B0125C	FASTA	313	36,643
	10 20 30 40 50 60 MSWFDKKIKP MLAVRSKPFS SDDHIYEVKW DGTRCLAFVD VEGKRVRLQN RRLLDITYRY 70 80 90 100 110 120 PEIKLLDAVE RNAILDGEVV VIKDGKPSFP LLQKREHVDS RFKIEILSKT IPAVYIVFDV 130 140 150 160 170 180 LYCDGWVVDL ELMERKKILS EVLQSRGRVV VEEWIEGKGE EFYRKAVEMG LEGIVAKKKD 190 200 210 220 230 240 GRYLIGKRSR LWKKIKKRNT LDCVIVGWIE GEGERAKTFG SLVLAVYEDG RLKHVGNVGT 250 260 270 280 290 300 GFDSEFLNWF SERLREIEVA KPHFEIETKN VHWVKPRYVC EVEFLEFTED GKLRAPVFLR 310 LREDKSPDEC RID

References

[1]

"The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus." Klenk H.-P., Clayton R.A., Tomb J.-F., White O., Nelson K.E., Ketchum K.A., Dodson R.J., Gwinn M.L., Hickey E.K., Peterson J.D., Richardson D.L., Kerlavage A.R., Graham D.E., Kyrpides N.C., Fleischmann R.D., Quackenbush J., Lee N.H., Sutton G.G. , Gill S.R., Kirkness E.F., Dougherty B.A., McKenney K., Adams M.D., Loftus B.J., Peterson S.N., Reich C.I., McNeil L.K., Badger J.H., Glodek A., Zhou L., Overbeek R., Gocayne J.D., Weidman J.F., McDonald L.A., Utterback T.R., Cotton M.D., Spriggs T., Artiach P., Kaine B.P., Sykes S.M., Sadow P.W., D'Andrea K.P., Bowman C., Fujii C., Garland S.A., Mason T.M., Olsen G.J., Fraser C.M., Smith H.O., Woese C.R., Venter J.C. Nature 390:364-370(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE000782 Genomic DNA. Translation: AAB89526.1.
PIR	D69465.
RefSeq	NP_070553.1. NC_000917.1.
3D structure databases
ProteinModelPortal	O28549.
ModBase	Search...
Protein-protein interaction databases
STRING	224325.AF1725.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAB89526; AAB89526; AF_1725.
GeneID	1484948.
KEGG	afu:AF1725.
Phylogenomic databases
eggNOG	COG1793.
KO	K01971.
OMA	VEVKYGQ.
Enzyme and pathway databases
BioCyc	AFUL224325:GJBC-1760-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR014146. DNA_pol_LigD_ligase_dom. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

O28549_ARCFU

Accession

Primary (citable) accession number: O28549

Entry history

Integrated into UniProtKB/TrEMBL:	January 1, 1998
Last sequence update:	January 1, 1998
Last modified:	May 1, 2013
This is version 77 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)