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O28549 (O28549_ARCFU) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 80. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length313 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AAB89526.1
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
O28549 [UniParc].

Last modified January 1, 1998. Version 1.
Checksum: 32F223CDD2B0125C

FASTA31336,643
        10         20         30         40         50         60 
MSWFDKKIKP MLAVRSKPFS SDDHIYEVKW DGTRCLAFVD VEGKRVRLQN RRLLDITYRY 

        70         80         90        100        110        120 
PEIKLLDAVE RNAILDGEVV VIKDGKPSFP LLQKREHVDS RFKIEILSKT IPAVYIVFDV 

       130        140        150        160        170        180 
LYCDGWVVDL ELMERKKILS EVLQSRGRVV VEEWIEGKGE EFYRKAVEMG LEGIVAKKKD 

       190        200        210        220        230        240 
GRYLIGKRSR LWKKIKKRNT LDCVIVGWIE GEGERAKTFG SLVLAVYEDG RLKHVGNVGT 

       250        260        270        280        290        300 
GFDSEFLNWF SERLREIEVA KPHFEIETKN VHWVKPRYVC EVEFLEFTED GKLRAPVFLR 

       310 
LREDKSPDEC RID 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE000782 Genomic DNA. Translation: AAB89526.1.
PIRD69465.
RefSeqNP_070553.1. NC_000917.1.

3D structure databases

ProteinModelPortalO28549.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING224325.AF1725.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAB89526; AAB89526; AF_1725.
GeneID1484948.
KEGGafu:AF1725.

Phylogenomic databases

eggNOGCOG1793.
KOK01971.
OMAVEVKYGQ.

Enzyme and pathway databases

BioCycAFUL224325:GJBC-1760-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameO28549_ARCFU
AccessionPrimary (citable) accession number: O28549
Entry history
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: April 16, 2014
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)