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O28549

- O28549_ARCFU

UniProt

O28549 - O28549_ARCFU

Protein
Submitted name:

DNA ligase, putative

Gene

AF_1725

Organism
Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 83 (01 Oct 2014)
      Sequence version 1 (01 Jan 1998)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciAFUL224325:GJBC-1760-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase, putativeImported
    Gene namesi
    Ordered Locus Names:AF_1725Imported
    OrganismiArchaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)Imported
    Taxonomic identifieri224325 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaArchaeoglobiArchaeoglobalesArchaeoglobaceaeArchaeoglobus
    ProteomesiUP000002199: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi224325.AF1725.

    Structurei

    3D structure databases

    ProteinModelPortaliO28549.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    KOiK01971.
    OMAiVEVKYGQ.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    O28549-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSWFDKKIKP MLAVRSKPFS SDDHIYEVKW DGTRCLAFVD VEGKRVRLQN    50
    RRLLDITYRY PEIKLLDAVE RNAILDGEVV VIKDGKPSFP LLQKREHVDS 100
    RFKIEILSKT IPAVYIVFDV LYCDGWVVDL ELMERKKILS EVLQSRGRVV 150
    VEEWIEGKGE EFYRKAVEMG LEGIVAKKKD GRYLIGKRSR LWKKIKKRNT 200
    LDCVIVGWIE GEGERAKTFG SLVLAVYEDG RLKHVGNVGT GFDSEFLNWF 250
    SERLREIEVA KPHFEIETKN VHWVKPRYVC EVEFLEFTED GKLRAPVFLR 300
    LREDKSPDEC RID 313
    Length:313
    Mass (Da):36,643
    Last modified:January 1, 1998 - v1
    Checksum:i32F223CDD2B0125C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE000782 Genomic DNA. Translation: AAB89526.1.
    PIRiD69465.
    RefSeqiNP_070553.1. NC_000917.1.
    WP_010879221.1. NC_000917.1.

    Genome annotation databases

    EnsemblBacteriaiAAB89526; AAB89526; AF_1725.
    GeneIDi1484948.
    KEGGiafu:AF1725.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE000782 Genomic DNA. Translation: AAB89526.1 .
    PIRi D69465.
    RefSeqi NP_070553.1. NC_000917.1.
    WP_010879221.1. NC_000917.1.

    3D structure databases

    ProteinModelPortali O28549.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 224325.AF1725.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB89526 ; AAB89526 ; AF_1725 .
    GeneIDi 1484948.
    KEGGi afu:AF1725.

    Phylogenomic databases

    eggNOGi COG1793.
    KOi K01971.
    OMAi VEVKYGQ.

    Enzyme and pathway databases

    BioCyci AFUL224325:GJBC-1760-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus."
      Klenk H.-P., Clayton R.A., Tomb J.-F., White O., Nelson K.E., Ketchum K.A., Dodson R.J., Gwinn M.L., Hickey E.K., Peterson J.D., Richardson D.L., Kerlavage A.R., Graham D.E., Kyrpides N.C., Fleischmann R.D., Quackenbush J., Lee N.H., Sutton G.G.
      , Gill S.R., Kirkness E.F., Dougherty B.A., McKenney K., Adams M.D., Loftus B.J., Peterson S.N., Reich C.I., McNeil L.K., Badger J.H., Glodek A., Zhou L., Overbeek R., Gocayne J.D., Weidman J.F., McDonald L.A., Utterback T.R., Cotton M.D., Spriggs T., Artiach P., Kaine B.P., Sykes S.M., Sadow P.W., D'Andrea K.P., Bowman C., Fujii C., Garland S.A., Mason T.M., Olsen G.J., Fraser C.M., Smith H.O., Woese C.R., Venter J.C.
      Nature 390:364-370(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126Imported.

    Entry informationi

    Entry nameiO28549_ARCFU
    AccessioniPrimary (citable) accession number: O28549
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 1, 1998
    Last sequence update: January 1, 1998
    Last modified: October 1, 2014
    This is version 83 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3