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Protein

Uncharacterized protein AF_1796

Gene

AF_1796

Organism
Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein AF_1796
Gene namesi
Ordered Locus Names:AF_1796
OrganismiArchaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
Taxonomic identifieri224325 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaArchaeoglobiArchaeoglobalesArchaeoglobaceaeArchaeoglobus
Proteomesi
  • UP000002199 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001365701 – 183Uncharacterized protein AF_1796Add BLAST183

Interactioni

Protein-protein interaction databases

STRINGi224325.AF1796.

Structurei

Secondary structure

1183
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi2 – 18Combined sources17
Helixi21 – 33Combined sources13
Beta strandi37 – 40Combined sources4
Helixi43 – 58Combined sources16
Beta strandi63 – 65Combined sources3
Beta strandi79 – 83Combined sources5
Beta strandi85 – 87Combined sources3
Helixi90 – 102Combined sources13
Beta strandi105 – 111Combined sources7
Helixi116 – 120Combined sources5
Beta strandi122 – 126Combined sources5
Helixi136 – 142Combined sources7
Helixi144 – 146Combined sources3
Helixi147 – 168Combined sources22
Helixi172 – 178Combined sources7

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1VIMX-ray1.36A/B/C/D2-183[»]
ProteinModelPortaliO28478.
SMRiO28478.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO28478.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini27 – 170SISPROSITE-ProRule annotationAdd BLAST144

Sequence similaritiesi

Belongs to the SIS family. PHI subfamily.Curated
Contains 1 SIS domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiarCOG00068. Archaea.
COG0794. LUCA.
KOiK08094.
OMAiFAMRLRH.

Family and domain databases

InterProiIPR017552. PHI/rmpB.
IPR001347. SIS.
[Graphical view]
PfamiPF01380. SIS. 1 hit.
[Graphical view]
TIGRFAMsiTIGR03127. RuMP_HxlB. 1 hit.
PROSITEiPS51464. SIS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O28478-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRFLEVVSE HIKNLRNHID LETVGEMIKL IDSARSIFVI GAGRSGYIAK
60 70 80 90 100
AFAMRLMHLG YTVYVVGETV TPRITDQDVL VAISGSGETT SVVNISKKAK
110 120 130 140 150
DIGSKLVAVT GKRDSSLAKM ADVVMVVKGK MKQERDEILS QLAPLGTMFE
160 170 180
LTAMIFLDAL VAEIMMQKHL TEKDLEARHA VLE
Length:183
Mass (Da):20,147
Last modified:January 1, 1998 - v1
Checksum:iFC2B8DA78E2EF14F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000782 Genomic DNA. Translation: AAB89472.1.
PIRiC69474.
RefSeqiWP_010879292.1. NC_000917.1.

Genome annotation databases

EnsemblBacteriaiAAB89472; AAB89472; AF_1796.
GeneIDi24795539.
KEGGiafu:AF_1796.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000782 Genomic DNA. Translation: AAB89472.1.
PIRiC69474.
RefSeqiWP_010879292.1. NC_000917.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1VIMX-ray1.36A/B/C/D2-183[»]
ProteinModelPortaliO28478.
SMRiO28478.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224325.AF1796.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAB89472; AAB89472; AF_1796.
GeneIDi24795539.
KEGGiafu:AF_1796.

Phylogenomic databases

eggNOGiarCOG00068. Archaea.
COG0794. LUCA.
KOiK08094.
OMAiFAMRLRH.

Miscellaneous databases

EvolutionaryTraceiO28478.

Family and domain databases

InterProiIPR017552. PHI/rmpB.
IPR001347. SIS.
[Graphical view]
PfamiPF01380. SIS. 1 hit.
[Graphical view]
TIGRFAMsiTIGR03127. RuMP_HxlB. 1 hit.
PROSITEiPS51464. SIS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiY1796_ARCFU
AccessioniPrimary (citable) accession number: O28478
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: January 1, 1998
Last modified: November 2, 2016
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.