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Protein

30S ribosomal protein S17

Gene

rps17

Organism
Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S17UniRule annotation
Gene namesi
Name:rps17UniRule annotation
Ordered Locus Names:AF_1916
OrganismiArchaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
Taxonomic identifieri224325 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaArchaeoglobiArchaeoglobalesArchaeoglobaceaeArchaeoglobus
Proteomesi
  • UP000002199 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001284961 – 11130S ribosomal protein S17Add BLAST111

Proteomic databases

PRIDEiO28363.

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi224325.AF1916.

Structurei

3D structure databases

ProteinModelPortaliO28363.
SMRiO28363.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uS17 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04096. Archaea.
COG0186. LUCA.
KOiK02961.
OMAiKKYERYE.
OrthoDBiPOG093Z0IP7.

Family and domain databases

HAMAPiMF_01345_A. Ribosomal_S17_A. 1 hit.
InterProiView protein in InterPro
IPR012340. NA-bd_OB-fold.
IPR000266. Ribosomal_S17/S11.
IPR028333. Ribosomal_S17_arc-typ.
IPR019978. Ribosomal_S17_archaeal.
IPR019979. Ribosomal_S17_CS.
PANTHERiPTHR10744. PTHR10744. 1 hit.
PTHR10744:SF13. PTHR10744:SF13. 1 hit.
PfamiView protein in Pfam
PF00366. Ribosomal_S17. 1 hit.
PRINTSiPR00973. RIBOSOMALS17.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD001295. Ribosomal_S17. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR03630. uS17_arch. 1 hit.
PROSITEiView protein in PROSITE
PS00056. RIBOSOMAL_S17. 1 hit.

Sequencei

Sequence statusi: Complete.

O28363-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRDIGIDVKP PERECEDENC PFHGTLSVRG QLLRGKVVKV YGKTAVIERE
60 70 80 90 100
LIRYVPKFER YMKKRSKLHA HNPRCIRARP GDIVTIGECR PISKTKSFVI
110
LEVVGNEGNK S
Length:111
Mass (Da):12,690
Last modified:January 1, 1998 - v1
Checksum:iC620937DCFA4ED89
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000782 Genomic DNA. Translation: AAB89337.1.
PIRiC69489.
RefSeqiWP_010879409.1. NC_000917.1.

Genome annotation databases

EnsemblBacteriaiAAB89337; AAB89337; AF_1916.
GeneIDi24795660.
KEGGiafu:AF_1916.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRS17_ARCFU
AccessioniPrimary (citable) accession number: O28363
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: January 1, 1998
Last modified: June 7, 2017
This is version 96 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families