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O28024

- O28024_ARCFU

UniProt

O28024 - O28024_ARCFU

Protein
Submitted name:

Uncharacterized protein

Gene

AF_2260

Organism
Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 71 (01 Oct 2014)
      Sequence version 1 (01 Jan 1998)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei129 – 1291Chloride 2Imported

    GO - Molecular functioni

    1. sequence-specific DNA binding Source: InterPro

    Enzyme and pathway databases

    BioCyciAFUL224325:GJBC-2309-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Ordered Locus Names:AF_2260Imported
    OrganismiArchaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)Imported
    Taxonomic identifieri224325 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaArchaeoglobiArchaeoglobalesArchaeoglobaceaeArchaeoglobus
    ProteomesiUP000002199: Chromosome

    Interactioni

    Protein-protein interaction databases

    DIPiDIP-60231N.
    STRINGi224325.AF2260.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3ZC0X-ray2.98A/B/C/D/E/F/G/H/I/J/K/L1-196[»]
    3ZC1X-ray3.27A/B/C/D/E/F/G/H1-196[»]
    ProteinModelPortaliO28024.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG2178.
    KOiK07477.
    OMAiHIRENLE.

    Family and domain databases

    Gene3Di1.20.58.200. 1 hit.
    InterProiIPR002848. Translin.
    IPR016069. Translin_C.
    [Graphical view]
    PANTHERiPTHR10741. PTHR10741. 1 hit.
    PfamiPF01997. Translin. 1 hit.
    [Graphical view]
    SUPFAMiSSF74784. SSF74784. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    O28024-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRLEECRKRL EELEAAREEL LKVLREMRIH STKSIALIHA GKVEEAEQEL    50
    KKAIELLEKV KAYREYPEIY FYLCNDAMQE LVEAIAFKNA ISGEFTFEID 100
    LEVTPAAFLN GFADAVGELR RYALTKLIEG DFKSAERMLE VMEKIYERLM 150
    EFTTFPDKLV SGLRKKLDVA RGGIERTKSD YIAAKVARLN ESLGGN 196
    Length:196
    Mass (Da):22,517
    Last modified:January 1, 1998 - v1
    Checksum:i2B1B14AD885017D1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE000782 Genomic DNA. Translation: AAB88989.1.
    PIRiD69532.
    RefSeqiNP_071085.1. NC_000917.1.

    Genome annotation databases

    EnsemblBacteriaiAAB88989; AAB88989; AF_2260.
    GeneIDi1485492.
    KEGGiafu:AF2260.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE000782 Genomic DNA. Translation: AAB88989.1 .
    PIRi D69532.
    RefSeqi NP_071085.1. NC_000917.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3ZC0 X-ray 2.98 A/B/C/D/E/F/G/H/I/J/K/L 1-196 [» ]
    3ZC1 X-ray 3.27 A/B/C/D/E/F/G/H 1-196 [» ]
    ProteinModelPortali O28024.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    DIPi DIP-60231N.
    STRINGi 224325.AF2260.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB88989 ; AAB88989 ; AF_2260 .
    GeneIDi 1485492.
    KEGGi afu:AF2260.

    Phylogenomic databases

    eggNOGi COG2178.
    KOi K07477.
    OMAi HIRENLE.

    Enzyme and pathway databases

    BioCyci AFUL224325:GJBC-2309-MONOMER.

    Family and domain databases

    Gene3Di 1.20.58.200. 1 hit.
    InterProi IPR002848. Translin.
    IPR016069. Translin_C.
    [Graphical view ]
    PANTHERi PTHR10741. PTHR10741. 1 hit.
    Pfami PF01997. Translin. 1 hit.
    [Graphical view ]
    SUPFAMi SSF74784. SSF74784. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus."
      Klenk H.-P., Clayton R.A., Tomb J.-F., White O., Nelson K.E., Ketchum K.A., Dodson R.J., Gwinn M.L., Hickey E.K., Peterson J.D., Richardson D.L., Kerlavage A.R., Graham D.E., Kyrpides N.C., Fleischmann R.D., Quackenbush J., Lee N.H., Sutton G.G.
      , Gill S.R., Kirkness E.F., Dougherty B.A., McKenney K., Adams M.D., Loftus B.J., Peterson S.N., Reich C.I., McNeil L.K., Badger J.H., Glodek A., Zhou L., Overbeek R., Gocayne J.D., Weidman J.F., McDonald L.A., Utterback T.R., Cotton M.D., Spriggs T., Artiach P., Kaine B.P., Sykes S.M., Sadow P.W., D'Andrea K.P., Bowman C., Fujii C., Garland S.A., Mason T.M., Olsen G.J., Fraser C.M., Smith H.O., Woese C.R., Venter J.C.
      Nature 390:364-370(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126Imported.
    2. "Structural basis for duplex RNA recognition and cleavage by Archaeoglobus fulgidus C3PO."
      Parizotto E.A., Lowe E.D., Parker J.S.
      Nat. Struct. Mol. Biol. 20:380-386(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (2.98 ANGSTROMS).

    Entry informationi

    Entry nameiO28024_ARCFU
    AccessioniPrimary (citable) accession number: O28024
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 1, 1998
    Last sequence update: January 1, 1998
    Last modified: October 1, 2014
    This is version 71 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3