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Protein
Submitted name:

Uncharacterized protein

Gene

AF_2260

Organism
Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciAFUL224325:GJBC-2309-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:AF_2260Imported
OrganismiArchaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)Imported
Taxonomic identifieri224325 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaArchaeoglobiArchaeoglobalesArchaeoglobaceaeArchaeoglobus
ProteomesiUP000002199 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

DIPiDIP-60231N.
STRINGi224325.AF2260.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3ZC0X-ray2.98A/B/C/D/E/F/G/H/I/J/K/L1-196[»]
3ZC1X-ray3.27A/B/C/D/E/F/G/H1-196[»]
ProteinModelPortaliO28024.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2178.
KOiK07477.
OMAiHIRENLE.

Family and domain databases

Gene3Di1.20.58.200. 1 hit.
InterProiIPR002848. Translin.
IPR016069. Translin_C.
[Graphical view]
PANTHERiPTHR10741. PTHR10741. 1 hit.
PfamiPF01997. Translin. 1 hit.
[Graphical view]
SUPFAMiSSF74784. SSF74784. 1 hit.

Sequencei

Sequence statusi: Complete.

O28024-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLEECRKRL EELEAAREEL LKVLREMRIH STKSIALIHA GKVEEAEQEL
60 70 80 90 100
KKAIELLEKV KAYREYPEIY FYLCNDAMQE LVEAIAFKNA ISGEFTFEID
110 120 130 140 150
LEVTPAAFLN GFADAVGELR RYALTKLIEG DFKSAERMLE VMEKIYERLM
160 170 180 190
EFTTFPDKLV SGLRKKLDVA RGGIERTKSD YIAAKVARLN ESLGGN
Length:196
Mass (Da):22,517
Last modified:January 1, 1998 - v1
Checksum:i2B1B14AD885017D1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000782 Genomic DNA. Translation: AAB88989.1.
PIRiD69532.
RefSeqiNP_071085.1. NC_000917.1.
WP_010879749.1. NC_000917.1.

Genome annotation databases

EnsemblBacteriaiAAB88989; AAB88989; AF_2260.
GeneIDi1485492.
KEGGiafu:AF2260.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000782 Genomic DNA. Translation: AAB88989.1.
PIRiD69532.
RefSeqiNP_071085.1. NC_000917.1.
WP_010879749.1. NC_000917.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3ZC0X-ray2.98A/B/C/D/E/F/G/H/I/J/K/L1-196[»]
3ZC1X-ray3.27A/B/C/D/E/F/G/H1-196[»]
ProteinModelPortaliO28024.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-60231N.
STRINGi224325.AF2260.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAB88989; AAB88989; AF_2260.
GeneIDi1485492.
KEGGiafu:AF2260.

Phylogenomic databases

eggNOGiCOG2178.
KOiK07477.
OMAiHIRENLE.

Enzyme and pathway databases

BioCyciAFUL224325:GJBC-2309-MONOMER.

Family and domain databases

Gene3Di1.20.58.200. 1 hit.
InterProiIPR002848. Translin.
IPR016069. Translin_C.
[Graphical view]
PANTHERiPTHR10741. PTHR10741. 1 hit.
PfamiPF01997. Translin. 1 hit.
[Graphical view]
SUPFAMiSSF74784. SSF74784. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus."
    Klenk H.-P., Clayton R.A., Tomb J.-F., White O., Nelson K.E., Ketchum K.A., Dodson R.J., Gwinn M.L., Hickey E.K., Peterson J.D., Richardson D.L., Kerlavage A.R., Graham D.E., Kyrpides N.C., Fleischmann R.D., Quackenbush J., Lee N.H., Sutton G.G.
    , Gill S.R., Kirkness E.F., Dougherty B.A., McKenney K., Adams M.D., Loftus B.J., Peterson S.N., Reich C.I., McNeil L.K., Badger J.H., Glodek A., Zhou L., Overbeek R., Gocayne J.D., Weidman J.F., McDonald L.A., Utterback T.R., Cotton M.D., Spriggs T., Artiach P., Kaine B.P., Sykes S.M., Sadow P.W., D'Andrea K.P., Bowman C., Fujii C., Garland S.A., Mason T.M., Olsen G.J., Fraser C.M., Smith H.O., Woese C.R., Venter J.C.
    Nature 390:364-370(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126Imported.
  2. "Structural basis for duplex RNA recognition and cleavage by Archaeoglobus fulgidus C3PO."
    Parizotto E.A., Lowe E.D., Parker J.S.
    Nat. Struct. Mol. Biol. 20:380-386(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.98 ANGSTROMS).

Entry informationi

Entry nameiO28024_ARCFU
AccessioniPrimary (citable) accession number: O28024
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: May 27, 2015
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.