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O28024

- O28024_ARCFU

UniProt

O28024 - O28024_ARCFU

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Protein
Submitted name:

Uncharacterized protein

Gene

AF_2260

Organism
Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei129 – 1291Chloride 2Imported

GO - Molecular functioni

  1. sequence-specific DNA binding Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciAFUL224325:GJBC-2309-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:AF_2260Imported
OrganismiArchaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)Imported
Taxonomic identifieri224325 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaArchaeoglobiArchaeoglobalesArchaeoglobaceaeArchaeoglobus
ProteomesiUP000002199: Chromosome

Interactioni

Protein-protein interaction databases

DIPiDIP-60231N.
STRINGi224325.AF2260.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3ZC0X-ray2.98A/B/C/D/E/F/G/H/I/J/K/L1-196[»]
3ZC1X-ray3.27A/B/C/D/E/F/G/H1-196[»]
ProteinModelPortaliO28024.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2178.
KOiK07477.
OMAiHIRENLE.

Family and domain databases

Gene3Di1.20.58.200. 1 hit.
InterProiIPR002848. Translin.
IPR016069. Translin_C.
[Graphical view]
PANTHERiPTHR10741. PTHR10741. 1 hit.
PfamiPF01997. Translin. 1 hit.
[Graphical view]
SUPFAMiSSF74784. SSF74784. 1 hit.

Sequencei

Sequence statusi: Complete.

O28024-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRLEECRKRL EELEAAREEL LKVLREMRIH STKSIALIHA GKVEEAEQEL
60 70 80 90 100
KKAIELLEKV KAYREYPEIY FYLCNDAMQE LVEAIAFKNA ISGEFTFEID
110 120 130 140 150
LEVTPAAFLN GFADAVGELR RYALTKLIEG DFKSAERMLE VMEKIYERLM
160 170 180 190
EFTTFPDKLV SGLRKKLDVA RGGIERTKSD YIAAKVARLN ESLGGN
Length:196
Mass (Da):22,517
Last modified:January 1, 1998 - v1
Checksum:i2B1B14AD885017D1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000782 Genomic DNA. Translation: AAB88989.1.
PIRiD69532.
RefSeqiNP_071085.1. NC_000917.1.

Genome annotation databases

EnsemblBacteriaiAAB88989; AAB88989; AF_2260.
GeneIDi1485492.
KEGGiafu:AF2260.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000782 Genomic DNA. Translation: AAB88989.1 .
PIRi D69532.
RefSeqi NP_071085.1. NC_000917.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3ZC0 X-ray 2.98 A/B/C/D/E/F/G/H/I/J/K/L 1-196 [» ]
3ZC1 X-ray 3.27 A/B/C/D/E/F/G/H 1-196 [» ]
ProteinModelPortali O28024.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

DIPi DIP-60231N.
STRINGi 224325.AF2260.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAB88989 ; AAB88989 ; AF_2260 .
GeneIDi 1485492.
KEGGi afu:AF2260.

Phylogenomic databases

eggNOGi COG2178.
KOi K07477.
OMAi HIRENLE.

Enzyme and pathway databases

BioCyci AFUL224325:GJBC-2309-MONOMER.

Family and domain databases

Gene3Di 1.20.58.200. 1 hit.
InterProi IPR002848. Translin.
IPR016069. Translin_C.
[Graphical view ]
PANTHERi PTHR10741. PTHR10741. 1 hit.
Pfami PF01997. Translin. 1 hit.
[Graphical view ]
SUPFAMi SSF74784. SSF74784. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus."
    Klenk H.-P., Clayton R.A., Tomb J.-F., White O., Nelson K.E., Ketchum K.A., Dodson R.J., Gwinn M.L., Hickey E.K., Peterson J.D., Richardson D.L., Kerlavage A.R., Graham D.E., Kyrpides N.C., Fleischmann R.D., Quackenbush J., Lee N.H., Sutton G.G.
    , Gill S.R., Kirkness E.F., Dougherty B.A., McKenney K., Adams M.D., Loftus B.J., Peterson S.N., Reich C.I., McNeil L.K., Badger J.H., Glodek A., Zhou L., Overbeek R., Gocayne J.D., Weidman J.F., McDonald L.A., Utterback T.R., Cotton M.D., Spriggs T., Artiach P., Kaine B.P., Sykes S.M., Sadow P.W., D'Andrea K.P., Bowman C., Fujii C., Garland S.A., Mason T.M., Olsen G.J., Fraser C.M., Smith H.O., Woese C.R., Venter J.C.
    Nature 390:364-370(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126Imported.
  2. "Structural basis for duplex RNA recognition and cleavage by Archaeoglobus fulgidus C3PO."
    Parizotto E.A., Lowe E.D., Parker J.S.
    Nat. Struct. Mol. Biol. 20:380-386(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.98 ANGSTROMS).

Entry informationi

Entry nameiO28024_ARCFU
AccessioniPrimary (citable) accession number: O28024
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: October 1, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteomeImported

External Data

Dasty 3