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O27983 (PDAD1_ARCFU) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 81. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Pyruvoyl-dependent arginine decarboxylase 1

Short name=PvlArgDC 1
EC=4.1.1.19
Gene names
Name:pdaD1
Ordered Locus Names:AF_2301
OrganismArchaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) [Reference proteome] [HAMAP]
Taxonomic identifier224325 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaArchaeoglobiArchaeoglobalesArchaeoglobaceaeArchaeoglobus

Protein attributes

Sequence length157 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-arginine = agmatine + CO2. HAMAP-Rule MF_01404

Cofactor

Pyruvoyl group By similarity. HAMAP-Rule MF_01404

Sequence similarities

Belongs to the PdaD family.

Sequence caution

The sequence AAB88952.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   LigandPyruvate
   Molecular functionDecarboxylase
Lyase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processarginine catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionarginine decarboxylase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 4040Pyruvoyl-dependent arginine decarboxylase 1 subunit beta By similarity
PRO_0000023304
Chain41 – 157117Pyruvoyl-dependent arginine decarboxylase 1 subunit alpha By similarity
PRO_0000023305

Sites

Site40 – 412Cleavage (non-hydrolytic) By similarity

Amino acid modifications

Modified residue411Pyruvic acid (Ser) By similarity

Sequences

Sequence LengthMass (Da)Tools
O27983 [UniParc].

Last modified July 11, 2002. Version 2.
Checksum: 2A77CE5332244078

FASTA15717,205
        10         20         30         40         50         60 
MLPRKVFFTK GVGRHTDPLV SFELALRDAG IEKFNLVTVS SIYPPYCEIV EAEKGLSELF 

        70         80         90        100        110        120 
PGQIVFCVMS RMTSNEQGKR IFASVGAAIP PDPSLNGYLT EYHGYCNGED AGRHAEESAA 

       130        140        150 
YMLKTAFEIE PARTFNITVE ADVEDCTTVV AAAVFVI 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE000782 Genomic DNA. Translation: AAB88952.1. Different initiation.
PIRE69537.
RefSeqNP_071126.1. NC_000917.1.

3D structure databases

ProteinModelPortalO27983.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING224325.AF2301.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAB88952; AAB88952; AF_2301.
GeneID1485533.
KEGGafu:AF2301.

Phylogenomic databases

eggNOGCOG1945.
KOK02626.
OMAGYISEYH.

Enzyme and pathway databases

BioCycAFUL224325:GJBC-2350-MONOMER.

Family and domain databases

Gene3D3.50.20.10. 1 hit.
HAMAPMF_01404. PvlArgDC.
InterProIPR016104. Pyr-dep_his/arg-deCO2ase.
IPR016105. Pyr-dep_his/arg-deCO2ase_sand.
IPR002724. Pyruvoyl-dep_arg_deCO2ase.
[Graphical view]
PfamPF01862. PvlArgDC. 1 hit.
[Graphical view]
PIRSFPIRSF005216. Pyruvoyl-dep_arg_deCO2ase. 1 hit.
ProDomPD010449. Pyruvoyl-dep_arg_deCO2ase. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF56271. SSF56271. 1 hit.
TIGRFAMsTIGR00286. TIGR00286. 1 hit.
ProtoNetSearch...

Entry information

Entry namePDAD1_ARCFU
AccessionPrimary (citable) accession number: O27983
Entry history
Integrated into UniProtKB/Swiss-Prot: July 11, 2002
Last sequence update: July 11, 2002
Last modified: May 14, 2014
This is version 81 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families