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Protein

50S ribosomal protein L10

Gene

rpl10

Organism
Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (Methanobacterium thermoautotrophicum)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L10UniRule annotation
Alternative name(s):
Acidic ribosomal protein P0 homologUniRule annotation
Gene namesi
Name:rpl10UniRule annotation
Synonyms:rplP0UniRule annotation
Ordered Locus Names:MTH_1681
OrganismiMethanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (Methanobacterium thermoautotrophicum)
Taxonomic identifieri187420 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanobacteriaMethanobacterialesMethanobacteriaceaeMethanothermobacter
Proteomesi
  • UP000005223 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001547971 – 33650S ribosomal protein L10Add BLAST336

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Forms a heptameric L10(L12)2(L12)2(L12)2 complex, where L10 forms an elongated spine to which the L12 dimers bind in a sequential fashion.UniRule annotation

Protein-protein interaction databases

STRINGi187420.MTH1681.

Structurei

3D structure databases

ProteinModelPortaliO27717.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L10P family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04288. Archaea.
COG0244. LUCA.
KOiK02864.
OMAiQKELYFA.

Family and domain databases

Gene3Di1.10.10.380. 2 hits.
HAMAPiMF_00280. Ribosomal_L10_arch. 1 hit.
InterProiIPR022909. 50S_L10_arch.
IPR013522. Ribosomal_L10_N_arc.
IPR001790. Ribosomal_L10P.
[Graphical view]
PfamiPF00466. Ribosomal_L10. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O27717-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAHVAEWKKK EVQELHDLIK GYEVVGIANL ADIPARQLQK MRQTLRDSAL
60 70 80 90 100
IRMSKKTLIS LALEKAGREL ENVDSLSDYM EGQPALIFTD MNPFKLFKIL
110 120 130 140 150
EDSKTPAPAK PGAIAPDDIV VPKGDTGFAP GPILGELQQI GIPAKIEKGK
160 170 180 190 200
IVVSNDHVVV KAGEEIPPKV AGILTRLDIQ PLEVGIDLRA AYENQTVYTA
210 220 230 240 250
DVLTIDEEKT LSDIQKAFSQ AFNLSVNAVI YTRETMPAII QKAASKSFNL
260 270 280 290 300
AYNASILTSE TTDLLLAKAY AQMLALAAAA AEINDEAVDD ELKEKLSSRA
310 320 330
AAPAPEEKEE EVEEEAEEEE EEEEEDAAAG LGALFG
Length:336
Mass (Da):36,511
Last modified:January 1, 1998 - v1
Checksum:iA5BA5E01EC80FD8F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000666 Genomic DNA. Translation: AAB86153.1.
PIRiG69091.
RefSeqiWP_010877288.1. NC_000916.1.

Genome annotation databases

EnsemblBacteriaiAAB86153; AAB86153; MTH_1681.
GeneIDi24854781.
KEGGimth:MTH_1681.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000666 Genomic DNA. Translation: AAB86153.1.
PIRiG69091.
RefSeqiWP_010877288.1. NC_000916.1.

3D structure databases

ProteinModelPortaliO27717.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi187420.MTH1681.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAB86153; AAB86153; MTH_1681.
GeneIDi24854781.
KEGGimth:MTH_1681.

Phylogenomic databases

eggNOGiarCOG04288. Archaea.
COG0244. LUCA.
KOiK02864.
OMAiQKELYFA.

Family and domain databases

Gene3Di1.10.10.380. 2 hits.
HAMAPiMF_00280. Ribosomal_L10_arch. 1 hit.
InterProiIPR022909. 50S_L10_arch.
IPR013522. Ribosomal_L10_N_arc.
IPR001790. Ribosomal_L10P.
[Graphical view]
PfamiPF00466. Ribosomal_L10. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRL10_METTH
AccessioniPrimary (citable) accession number: O27717
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: January 1, 1998
Last modified: November 2, 2016
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.