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Protein

50S ribosomal protein L39e

Gene

rpl39e

Organism
Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (Methanobacterium thermoautotrophicum)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L39e
Gene namesi
Name:rpl39e
Ordered Locus Names:MTH_1613
OrganismiMethanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (Methanobacterium thermoautotrophicum)
Taxonomic identifieri187420 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanobacteriaMethanobacterialesMethanobacteriaceaeMethanothermobacter
Proteomesi
  • UP000005223 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001270531 – 5150S ribosomal protein L39eAdd BLAST51

Interactioni

Protein-protein interaction databases

STRINGi187420.MTH1613.

Structurei

3D structure databases

ProteinModelPortaliO27650.
SMRiO27650.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiarCOG04177. Archaea.
COG2167. LUCA.
KOiK02924.
OMAiMTHPKRR.
OrthoDBiPOG093Z0N59.

Family and domain databases

Gene3Di1.10.1620.10. 1 hit.
HAMAPiMF_00629. Ribosomal_L39e. 1 hit.
InterProiView protein in InterPro
IPR000077. Ribosomal_L39.
IPR020083. Ribosomal_L39_CS.
IPR023626. Ribosomal_L39e_dom.
PANTHERiPTHR19970. PTHR19970. 1 hit.
PfamiView protein in Pfam
PF00832. Ribosomal_L39. 1 hit.
SUPFAMiSSF48662. SSF48662. 1 hit.
PROSITEiView protein in PROSITE
PS00051. RIBOSOMAL_L39E. 1 hit.

Sequencei

Sequence statusi: Complete.

O27650-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRNKHVARK LRMAKANRQN RRVPAWVMVK TNYRVRSHPK MRHWRRTKLK

V
Length:51
Mass (Da):6,366
Last modified:January 1, 1998 - v1
Checksum:i09CA0F0CFC2B3936
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000666 Genomic DNA. Translation: AAB86086.1.
PIRiE69082.
RefSeqiWP_010877221.1. NC_000916.1.

Genome annotation databases

EnsemblBacteriaiAAB86086; AAB86086; MTH_1613.
GeneIDi9703905.
KEGGimth:MTH_1613.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRL39_METTH
AccessioniPrimary (citable) accession number: O27650
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: January 1, 1998
Last modified: June 7, 2017
This is version 90 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families