O27379 (O27379_METTH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Conserved protein EMBL AAB85802.1

Gene names

Ordered Locus Names:

MTH_1324 EMBL AAB85802.1

Organism

Methanobacterium thermoautotrophicum (strain Delta H)

Taxonomic identifier

187420 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanobacteria › Methanobacteriales › Methanobacteriaceae › Methanothermobacter

Protein attributes

Sequence length	116 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular function	DNA-directed RNA polymerase activity Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O27379 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: 90C2112F8978F3AE	FASTA	116	13,479
	10 20 30 40 50 60 MIPMIGKKVL ESEPVSMAEV KEILEKFGED HELTYEQNLV LDHVTRFSRL DPEKSRELVE 70 80 90 100 110 ELMDIPNIKR RHAVKIADIM PVDISDLRLI FAKERVPIKA DDLPGILEVI DKYRVE

References

[1]

"Complete genome sequence of Methanobacterium thermoautotrophicum deltaH: functional analysis and comparative genomics." Smith D.R., Doucette-Stamm L.A., Deloughery C., Lee H.-M., Dubois J., Aldredge T., Bashirzadeh R., Blakely D., Cook R., Gilbert K., Harrison D., Hoang L., Keagle P., Lumm W., Pothier B., Qiu D., Spadafora R., Vicare R. , Wang Y., Wierzbowski J., Gibson R., Jiwani N., Caruso A., Bush D., Safer H., Patwell D., Prabhakar S., McDougall S., Shimer G., Goyal A., Pietrovski S., Church G.M., Daniels C.J., Mao J.-I., Rice P., Noelling J., Reeve J.N. J. Bacteriol. 179:7135-7155(1997) [PubMed: 9371463] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Delta H.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE000666 Genomic DNA. Translation: AAB85802.1.
PIR	A69043.
RefSeq	NP_276441.1. NC_000916.1.
3D structure databases
HSSP	HSSP built from PDB template 1GO3 based on UniProtKB Q60351.
ProteinModelPortal	O27379.
ModBase	Search...
Protein-protein interaction databases
STRING	O27379.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1471041.
GenomeReviews	Gene locus MTH_1324 in contig AE000666_GR.
KEGG	mth:MTH1324.
NMPDR	fig|187420.1.peg.1296.
Phylogenomic databases
eggNOG	arNOG11473.
HOGENOM	HBG321515.
OMA	MTIFKEK.
ProtClustDB	PRK14981.
Family and domain databases
InterPro	IPR010997. HRDC-like. IPR015906. HRDC-like_sub1. IPR015907. HRDC-like_sub2. IPR010924. RNA_pol_F_arc. IPR005574. RNA_pol_II_Rpb4. [Graphical view]
Gene3D	G3DSA:1.10.150.80. HRDC-like_sub1. 1 hit. G3DSA:1.10.287.420. HRDC-like_sub2. 1 hit.
KO	K03051.
Pfam	PF03874. RNA_pol_Rpb4. 1 hit. [Graphical view]
PIRSF	PIRSF005053. RNA_pol_F_arch. 1 hit.
SUPFAM	SSF47819. HRDC_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

O27379_METTH

Accession

Primary (citable) accession number: O27379

Entry history

Integrated into UniProtKB/TrEMBL:	January 1, 1998
Last sequence update:	January 1, 1998
Last modified:	November 16, 2011
This is version 57 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)