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Protein
Submitted name:

Conserved protein

Gene

MTH_1221

Organism
Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (Methanobacterium thermoautotrophicum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei74ATP; via amide nitrogenCombined sources1
Binding sitei102ATPCombined sources1
Binding sitei118ATPCombined sources1
Binding sitei151ATPCombined sources1
Binding sitei175ATPCombined sources1
Binding sitei246ATPCombined sources1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi95 – 98ATPCombined sources4

GO - Molecular functioni

Keywordsi

LigandATP-bindingCombined sources, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Conserved proteinImported
Gene namesi
Ordered Locus Names:MTH_1221Imported
OrganismiMethanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (Methanobacterium thermoautotrophicum)Imported
Taxonomic identifieri187420 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanobacteriaMethanobacterialesMethanobacteriaceaeMethanothermobacter
Proteomesi
  • UP000005223 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi187420.MTH1221.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
5D1OX-ray2.65A/B4-381[»]
5D1PX-ray2.20A/B4-381[»]
ProteinModelPortaliO27289.
SMRiO27289.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini91 – 240RNA_ligaseInterPro annotationAdd BLAST150

Phylogenomic databases

eggNOGiarCOG04218. Archaea.
COG1423. LUCA.
KOiK07468.
OMAiICPFTTK.
OrthoDBiPOG093Z048P.

Family and domain databases

CDDicd07894. Adenylation_RNA_ligase. 1 hit.
InterProiView protein in InterPro
IPR021122. RNA_ligase_dom_REL/Rnl2.
IPR001072. Uncharacterised_MJ0414.
PfamiView protein in Pfam
PF09414. RNA_ligase. 1 hit.
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

O27289-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNSMNSDIPF DLIQERTGVP SSRLKVAFAR GSLRLLESAG MQALLFKKPL
60 70 80 90 100
GDLEAGTVIY LGDETEVIRG FPKIRRTLLL SPTIQEHFRD RVAVEEKMNG
110 120 130 140 150
YNVRIACLSS GETVALTRGG HVCPFTTRKA QELLDLSEFF REHPDLVICG
160 170 180 190 200
EMIGRDNPYV SQDYPEVGPL GFRVFDLREK NTNRPLPVEE RRALLDSYGL
210 220 230 240 250
PNVRLFGVYP IEEAASEVAD IIRALGMAGR EGVVMKDPSM EVPPLKYTSS
260 270 280 290 300
QAHARELAYA FSYPFDFGRP FFFSRVIREG FQAYELDESD DETRERARRL
310 320 330 340 350
GEAIIYPMLE RIKSISAGEA AYEDTVIDVE DREAAEEFIR HLVRLGVSAT
360 370 380
LADYRDGRAT IRRFYQSTTD RINNYLKGGL Y
Length:381
Mass (Da):43,146
Last modified:January 1, 1998 - v1
Checksum:i1843BF4D52E45A1B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000666 Genomic DNA. Translation: AAB85710.1.
PIRiB69030.

Genome annotation databases

EnsemblBacteriaiAAB85710; AAB85710; MTH_1221.
KEGGimth:MTH_1221.
PATRICifig|187420.15.peg.1199.

Similar proteinsi

Entry informationi

Entry nameiO27289_METTH
AccessioniPrimary (citable) accession number: O27289
Entry historyiIntegrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: August 30, 2017
This is version 84 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported