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Protein
Submitted name:

Transcriptional regulator related protein

Gene

MTH_1063

Organism
Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (Methanobacterium thermoautotrophicum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi34 – 53H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator related proteinImported
Gene namesi
Ordered Locus Names:MTH_1063Imported
OrganismiMethanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (Methanobacterium thermoautotrophicum)Imported
Taxonomic identifieri187420 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanobacteriaMethanobacterialesMethanobacteriaceaeMethanothermobacter
Proteomesi
  • UP000005223 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi187420.MTH1063.

Structurei

3D structure databases

ProteinModelPortaliO27135.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 71HTH tetR-type DNA-bindingInterPro annotationAdd BLAST61

Phylogenomic databases

eggNOGiarCOG02644. Archaea.
ENOG410XUF9. LUCA.
OMAiCTAEIGK.
OrthoDBiPOG093Z0CIA.

Family and domain databases

InterProiView protein in InterPro
IPR023772. DNA-bd_HTH_TetR-type_CS.
IPR009057. Homeobox-like.
IPR001647. HTH_TetR.
IPR011075. Tet_transcr_reg_TetR-rel_C.
PfamiView protein in Pfam
PF00440. TetR_N. 1 hit.
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiView protein in PROSITE
PS01081. HTH_TETR_1. 1 hit.
PS50977. HTH_TETR_2. 1 hit.

Sequencei

Sequence statusi: Complete.

O27135-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPSRRERER ERRREQIIRA AEKAFFARGY DRVTMDEIAE EAEVNKALLY
60 70 80 90 100
YYFKNKESLF FAVNLYGVRI LHSMYRRCLE LDTDGYGKVR AMVEALYSFS
110 120 130 140 150
KEHPDYFRIY CYSGTERFEL SESEDAREIV DLRTGMWRLM VEAIMEGMND
160 170 180 190 200
GSIRSDLDPV ELSIYIHTLA INALNLDFTS RMVLEARNIS RDRFWEDLEV

FLESALRP
Length:208
Mass (Da):24,681
Last modified:January 1, 1998 - v1
Checksum:i68DE33851966B91D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000666 Genomic DNA. Translation: AAB85552.1.
PIRiB69008.
RefSeqiWP_010876687.1. NC_000916.1.

Genome annotation databases

EnsemblBacteriaiAAB85552; AAB85552; MTH_1063.
GeneIDi1471471.
KEGGimth:MTH_1063.
PATRICifig|187420.15.peg.1040.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiO27135_METTH
AccessioniPrimary (citable) accession number: O27135
Entry historyiIntegrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: June 7, 2017
This is version 109 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported