O27034 (VATD_METTH) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
V-type ATP synthase subunit D

Alternative name(s):
V-ATPase subunit D

Gene names

Name:	atpD
Ordered Locus Names:	MTH_953

Organism

Methanobacterium thermoautotrophicum (strain Delta H)

Taxonomic identifier

187420 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanobacteria › Methanobacteriales › Methanobacteriaceae › Methanothermobacter

Protein attributes

Sequence length	213 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Produces ATP from ADP in the presence of a proton gradient across the membrane. HAMAP MF_00271
Sequence similarities	Belongs to the V-ATPase D subunit family.

Ontologies

Keywords
Biological process	ATP synthesis Hydrogen ion transport Ion transport Transport
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	ATP biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW ATP hydrolysis coupled proton transport Inferred from electronic annotation. Source: InterPro
Cellular component	proton-transporting two-sector ATPase complex, catalytic domain Inferred from electronic annotation. Source: InterPro
Molecular function	proton-transporting ATPase activity, rotational mechanism Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 213	213	V-type ATP synthase subunit D HAMAP MF_00271		PRO_0000144253

Sequences

	Sequence		Length	Mass (Da)
	O27034 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: BBF528C535720086	FASTA	213	24,523
	10 20 30 40 50 60 MAQEMIEGIN PTRMELLKLK QREKLAVKGY SLLKEKRNAL IMEFFNILER VKGSREKVEE 70 80 90 100 110 120 HLKEAFSDLT EAQVLMGDTA VERAAMSVRE SVEVDIDSRS IMGVVVPVVD ARATQRTVVE 130 140 150 160 170 180 RGYGLVDTSV KLDEAARKFE ESLALIIELG EIEKTIRLLA GEIESTKRRV NALEHIIIPR 190 200 210 LKNTVKYIEM RLEEMERENF VRLKMIKKSM EME

References

[1]

"Complete genome sequence of Methanobacterium thermoautotrophicum deltaH: functional analysis and comparative genomics." Smith D.R., Doucette-Stamm L.A., Deloughery C., Lee H.-M., Dubois J., Aldredge T., Bashirzadeh R., Blakely D., Cook R., Gilbert K., Harrison D., Hoang L., Keagle P., Lumm W., Pothier B., Qiu D., Spadafora R., Vicare R. , Wang Y., Wierzbowski J., Gibson R., Jiwani N., Caruso A., Bush D., Safer H., Patwell D., Prabhakar S., McDougall S., Shimer G., Goyal A., Pietrovski S., Church G.M., Daniels C.J., Mao J.-I., Rice P., Noelling J., Reeve J.N. J. Bacteriol. 179:7135-7155(1997) [PubMed: 9371463] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Delta H.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE000666 Genomic DNA. Translation: AAB85449.1.
PIR	E69227.
RefSeq	NP_276088.1. NC_000916.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
IntAct	O27034. 1 interaction.
STRING	O27034.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1471361.
GenomeReviews	Gene locus MTH_953 in contig AE000666_GR.
KEGG	mth:MTH953.
NMPDR	fig|187420.1.peg.943.
Phylogenomic databases
eggNOG	arNOG08411.
HOGENOM	HBG732046.
OMA	IIPRIEN.
PhylomeDB	O27034.
ProtClustDB	PRK00373.
Enzyme and pathway databases
BioCyc	MTHE187420:MTH953-MONOMER.
Family and domain databases
HAMAP	MF_00271. ATP_synth_D_arch. [Tree]
InterPro	IPR002699. ATPase_V1/A1-cplx_dsu. [Graphical view]
KO	K02120.
PANTHER	PTHR11671. ATPase_V1/A1_D. 1 hit.
Pfam	PF01813. ATP-synt_D. 1 hit. [Graphical view]
TIGRFAMs	TIGR00309. V_ATPase_subD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

VATD_METTH

Accession

Primary (citable) accession number: O27034

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 24, 2001
Last sequence update:	January 1, 1998
Last modified:	November 16, 2011
This is version 75 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program