O26398 (O26398_METTH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
DNA-directed RNA polymerase RuleBase RU004279
EC=2.7.7.6 RuleBase RU004279

Gene names

Ordered Locus Names:

MTH_298 EMBL AAB84804.1

Organism

Methanobacterium thermoautotrophicum (strain Delta H)

Taxonomic identifier

187420 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanobacteria › Methanobacteriales › Methanobacteriaceae › Methanothermobacter

Protein attributes

Sequence length	89 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). RuleBase RU004279
Sequence similarities	Belongs to the RNA polymerase beta' chain family. RuleBase RU004279

Ontologies

Keywords
Biological process	Transcription
Cellular component	DNA-directed RNA polymerase RuleBase RU004279
Molecular function	Nucleotidyltransferase RuleBase RU004279 Transferase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro DNA-directed RNA polymerase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O26398 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: B2DD6822A388B520	FASTA	89	10,300
	10 20 30 40 50 60 MEKEENFTPL VNRVYSLARR DRCPHCEEEQ QEIKLDKPVS IVEGDYKLTP SEVKERLERI 70 80 SDDDALILGV NPQVARPEWM VLTVLPVPP

References

[1]

"Complete genome sequence of Methanobacterium thermoautotrophicum deltaH: functional analysis and comparative genomics." Smith D.R., Doucette-Stamm L.A., Deloughery C., Lee H.-M., Dubois J., Aldredge T., Bashirzadeh R., Blakely D., Cook R., Gilbert K., Harrison D., Hoang L., Keagle P., Lumm W., Pothier B., Qiu D., Spadafora R., Vicare R. , Wang Y., Wierzbowski J., Gibson R., Jiwani N., Caruso A., Bush D., Safer H., Patwell D., Prabhakar S., McDougall S., Shimer G., Goyal A., Pietrovski S., Church G.M., Daniels C.J., Mao J.-I., Rice P., Noelling J., Reeve J.N. J. Bacteriol. 179:7135-7155(1997) [PubMed: 9371463] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Delta H.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE000666 Genomic DNA. Translation: AAB84804.1.
PIR	H69137.
RefSeq	NP_275441.1. NC_000916.1.
3D structure databases
ProteinModelPortal	O26398.
ModBase	Search...
Protein-protein interaction databases
STRING	O26398.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1470259.
GenomeReviews	Gene locus MTH_298 in contig AE000666_GR.
KEGG	mth:MTH298.
NMPDR	fig|187420.1.peg.296.
Phylogenomic databases
eggNOG	arNOG04559.
Family and domain databases
InterPro	IPR007080. RNA_pol_Rpb1_1. [Graphical view]
KO	K03041.
Pfam	PF04997. RNA_pol_Rpb1_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

O26398_METTH

Accession

Primary (citable) accession number: O26398

Entry history

Integrated into UniProtKB/TrEMBL:	January 1, 1998
Last sequence update:	January 1, 1998
Last modified:	November 16, 2011
This is version 59 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)