O26397 (O26397_METTH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
DNA-directed RNA polymerase RuleBase RU004279
EC=2.7.7.6 RuleBase RU004279

Gene names

Ordered Locus Names:

MTH_297 EMBL AAB84803.1

Organism

Methanobacterium thermoautotrophicum (strain Delta H)

Taxonomic identifier

187420 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanobacteria › Methanobacteriales › Methanobacteriaceae › Methanothermobacter

Protein attributes

Sequence length	133 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). RuleBase RU004279
Sequence similarities	Belongs to the RNA polymerase beta' chain family. RuleBase RU004279

Ontologies

Keywords
Biological process	Transcription
Cellular component	DNA-directed RNA polymerase RuleBase RU004279
Molecular function	Nucleotidyltransferase RuleBase RU004279 Transferase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro DNA-directed RNA polymerase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O26397 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: 32846C7761DB84A9	FASTA	133	15,086
	10 20 30 40 50 60 MRGTLKKIGG IEFGLMSPED IRKISVAQIV TPDTYNEDGY PIENGLMDPR LGVIDPRFRC 70 80 90 100 110 120 WTCGARGGEC PGHFGSINLA RPVIHVGFAD TIHKILRSTC RKCGRVLLTG TEIEEYIRGY 130 LKPWRKRKTS RHW

References

[1]

"Complete genome sequence of Methanobacterium thermoautotrophicum deltaH: functional analysis and comparative genomics." Smith D.R., Doucette-Stamm L.A., Deloughery C., Lee H.-M., Dubois J., Aldredge T., Bashirzadeh R., Blakely D., Cook R., Gilbert K., Harrison D., Hoang L., Keagle P., Lumm W., Pothier B., Qiu D., Spadafora R., Vicare R. , Wang Y., Wierzbowski J., Gibson R., Jiwani N., Caruso A., Bush D., Safer H., Patwell D., Prabhakar S., McDougall S., Shimer G., Goyal A., Pietrovski S., Church G.M., Daniels C.J., Mao J.-I., Rice P., Noelling J., Reeve J.N. J. Bacteriol. 179:7135-7155(1997) [PubMed: 9371463] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Delta H.

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Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE000666 Genomic DNA. Translation: AAB84803.1.
PIR	G69137.
RefSeq	NP_275440.1. NC_000916.1.
3D structure databases
HSSP	HSSP built from PDB template 1I50 based on UniProtKB P04050.
ProteinModelPortal	O26397.
ModBase	Search...
Protein-protein interaction databases
STRING	O26397.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1470258.
GenomeReviews	Gene locus MTH_297 in contig AE000666_GR.
KEGG	mth:MTH297.
NMPDR	fig|187420.1.peg.295.
Phylogenomic databases
eggNOG	arNOG04559.
Family and domain databases
InterPro	IPR007080. RNA_pol_Rpb1_1. [Graphical view]
KO	K03041.
Pfam	PF04997. RNA_pol_Rpb1_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

O26397_METTH

Accession

Primary (citable) accession number: O26397

Entry history

Integrated into UniProtKB/TrEMBL:	January 1, 1998
Last sequence update:	January 1, 1998
Last modified:	November 16, 2011
This is version 63 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)