O26364 (O26364_METTH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA-dependent RNA polymerase, subunit E' EMBL AAB84770.1

Gene names

Ordered Locus Names:

MTH_264 EMBL AAB84770.1

Organism

Methanobacterium thermoautotrophicum (strain Delta H)

Taxonomic identifier

187420 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanobacteria › Methanobacteriales › Methanobacteriaceae › Methanothermobacter

Protein attributes

Sequence length	184 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro DNA-directed RNA polymerase activity Inferred from electronic annotation. Source: InterPro RNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O26364 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: 37AAB7B39D631813	FASTA	184	20,695
	10 20 30 40 50 60 MYYVTKIVDT VRIPPDRFEE PLEEVAVEVL NETYVGRMDK NLGQLITVKE IEDIGIGKVI 70 80 90 100 110 120 MGDGAAYHEV TFTALFFKPE LHEIVEGEVI EIAEFGAFVR IGPVDGLVHV SQVTDDYITY 130 140 150 160 170 180 DPKKGSLTGK ESGRRLDEGD LVRARIVALS LKGRREGVKV GLTMRQPGLG KFEWIEEEKR KSKK

References

[1]

"Complete genome sequence of Methanobacterium thermoautotrophicum deltaH: functional analysis and comparative genomics." Smith D.R., Doucette-Stamm L.A., Deloughery C., Lee H.-M., Dubois J., Aldredge T., Bashirzadeh R., Blakely D., Cook R., Gilbert K., Harrison D., Hoang L., Keagle P., Lumm W., Pothier B., Qiu D., Spadafora R., Vicare R. , Wang Y., Wierzbowski J., Gibson R., Jiwani N., Caruso A., Bush D., Safer H., Patwell D., Prabhakar S., McDougall S., Shimer G., Goyal A., Pietrovski S., Church G.M., Daniels C.J., Mao J.-I., Rice P., Noelling J., Reeve J.N. J. Bacteriol. 179:7135-7155(1997) [PubMed: 9371463] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Delta H.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE000666 Genomic DNA. Translation: AAB84770.1.
PIR	C69133.
RefSeq	NP_275407.1. NC_000916.1.
3D structure databases
HSSP	HSSP built from PDB template 1GO3 based on UniProtKB Q57840.
ProteinModelPortal	O26364.
ModBase	Search...
Protein-protein interaction databases
STRING	O26364.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1470225.
GenomeReviews	Gene locus MTH_264 in contig AE000666_GR.
KEGG	mth:MTH264.
NMPDR	fig|187420.1.peg.262.
Phylogenomic databases
eggNOG	arNOG09519.
HOGENOM	HBG512792.
OMA	PRDSKIG.
PhylomeDB	O26364.
ProtClustDB	PRK08563.
Family and domain databases
InterPro	IPR004519. DNA-dir_RNA_polE. IPR012340. NA-bd_OB-fold. IPR016027. NA-bd_OB-fold-like. IPR003029. Rbsml_prot_S1_RNA-bd_dom. IPR022967. RNA-binding_domain_S1. IPR005576. RNA_pol_Rpb7_N. [Graphical view]
Gene3D	G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit. G3DSA:3.30.1490.120. RNA_pol_Rpb7_N. 1 hit.
KO	K03049.
Pfam	PF03876. RNA_pol_Rpb7_N. 1 hit. PF00575. S1. 1 hit. [Graphical view]
SMART	SM00316. S1. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit. SSF88798. RNA_pol_Rpb7_N. 1 hit.
TIGRFAMs	TIGR00448. RpoE. 1 hit.
PROSITE	PS50126. S1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

O26364_METTH

Accession

Primary (citable) accession number: O26364

Entry history

Integrated into UniProtKB/TrEMBL:	January 1, 1998
Last sequence update:	January 1, 1998
Last modified:	November 16, 2011
This is version 58 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)