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Protein

30S ribosomal protein S8e

Gene

rps8e

Organism
Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (Methanobacterium thermoautotrophicum)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciMTHE187420:GJNM-207-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S8e
Gene namesi
Name:rps8e
Ordered Locus Names:MTH_207
OrganismiMethanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (Methanobacterium thermoautotrophicum)
Taxonomic identifieri187420 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanobacteriaMethanobacterialesMethanobacteriaceaeMethanothermobacter
Proteomesi
  • UP000005223 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 12712730S ribosomal protein S8ePRO_0000122271Add
BLAST

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.By similarity

Protein-protein interaction databases

STRINGi187420.MTH207.

Structurei

Secondary structure

1
127
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi62 – 654Combined sources
Turni67 – 693Combined sources
Beta strandi72 – 754Combined sources
Beta strandi77 – 815Combined sources
Beta strandi100 – 11011Combined sources
Helixi116 – 1183Combined sources
Beta strandi121 – 1255Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2KCPNMR-A38-127[»]
2KCYNMR-A38-127[»]
ProteinModelPortaliO26309.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO26309.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S8e family.Curated

Phylogenomic databases

eggNOGiarCOG04154. Archaea.
COG2007. LUCA.
KOiK02995.
OMAiNPNYVRR.

Family and domain databases

HAMAPiMF_00029. Ribosomal_S8e. 1 hit.
InterProiIPR020919. Ribosomal_protein_S8e_arc.
IPR001047. Ribosomal_S8e.
IPR022309. Ribosomal_S8e/biogenesis_NSA2.
IPR018283. Ribosomal_S8e_CS.
[Graphical view]
PANTHERiPTHR10394. PTHR10394. 1 hit.
PfamiPF01201. Ribosomal_S8e. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00307. eS8. 1 hit.
PROSITEiPS01193. RIBOSOMAL_S8E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O26309-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAIWQGKSMK KPSGGRAKMN RGKRKYELGR EPAETKIGDR RVRLIRTRGG
60 70 80 90 100
NTKVRLASDT RINVVDPETG KVEIAEIRNV VENTANPHFV RRNIITRGAV
110 120
VETNLGNVRV TSRPGQDGVI NGVLIRE
Length:127
Mass (Da):14,155
Last modified:January 1, 1998 - v1
Checksum:iFF23D62395446BEA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000666 Genomic DNA. Translation: AAB84713.1.
PIRiD69125.
RefSeqiWP_010875846.1. NC_000916.1.

Genome annotation databases

EnsemblBacteriaiAAB84713; AAB84713; MTH_207.
GeneIDi1470168.
KEGGimth:MTH_207.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000666 Genomic DNA. Translation: AAB84713.1.
PIRiD69125.
RefSeqiWP_010875846.1. NC_000916.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2KCPNMR-A38-127[»]
2KCYNMR-A38-127[»]
ProteinModelPortaliO26309.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi187420.MTH207.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAB84713; AAB84713; MTH_207.
GeneIDi1470168.
KEGGimth:MTH_207.

Phylogenomic databases

eggNOGiarCOG04154. Archaea.
COG2007. LUCA.
KOiK02995.
OMAiNPNYVRR.

Enzyme and pathway databases

BioCyciMTHE187420:GJNM-207-MONOMER.

Miscellaneous databases

EvolutionaryTraceiO26309.

Family and domain databases

HAMAPiMF_00029. Ribosomal_S8e. 1 hit.
InterProiIPR020919. Ribosomal_protein_S8e_arc.
IPR001047. Ribosomal_S8e.
IPR022309. Ribosomal_S8e/biogenesis_NSA2.
IPR018283. Ribosomal_S8e_CS.
[Graphical view]
PANTHERiPTHR10394. PTHR10394. 1 hit.
PfamiPF01201. Ribosomal_S8e. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00307. eS8. 1 hit.
PROSITEiPS01193. RIBOSOMAL_S8E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS8E_METTH
AccessioniPrimary (citable) accession number: O26309
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: January 1, 1998
Last modified: June 8, 2016
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.