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Protein

DNA repair protein RecN

Gene

recN

Organism
Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

May be involved in recombinational repair of damaged DNA.By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi36 – 438ATPSequence Analysis

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

DNA damage, DNA repair

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciHPY:HP1393-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
DNA repair protein RecN
Alternative name(s):
Recombination protein N
Gene namesi
Name:recN
Ordered Locus Names:HP_1393
OrganismiHelicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Taxonomic identifieri85962 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
ProteomesiUP000000429 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 524524DNA repair protein RecNPRO_0000188019Add
BLAST

Proteomic databases

PRIDEiO25943.

Interactioni

Protein-protein interaction databases

DIPiDIP-3217N.
IntActiO25943. 5 interactions.
MINTiMINT-173060.
STRINGi85962.HP1393.

Structurei

3D structure databases

ProteinModelPortaliO25943.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RecN family.Curated

Phylogenomic databases

eggNOGiCOG0497.
KOiK03631.
OMAiFMLLEME.
OrthoDBiEOG6WQD34.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR003593. AAA+_ATPase.
IPR004604. DNA_recomb/repair_RecN.
IPR027417. P-loop_NTPase.
IPR003395. RecF/RecN/SMC_N.
[Graphical view]
PANTHERiPTHR11059. PTHR11059. 1 hit.
PfamiPF02463. SMC_N. 1 hit.
[Graphical view]
PIRSFiPIRSF003128. RecN. 1 hit.
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.

Sequencei

Sequence statusi: Complete.

O25943-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRDFNNAQIT RLKVRQNAVF EKLDLEFKDG LSAISGASGV GKSVLIASLL
60 70 80 90 100
GAFGLKESNA SNIEVELIAP FLDTEEYGIF REDEHEPLVI SVIKKEKTRY
110 120 130 140 150
FLNQTSLSKN TLKALLKGLI KRLSNDRFSQ NELNDILMLS LLDGYIQNEN
160 170 180 190 200
KAFSPLLGAL EEKFTRLEKL EKERRLLEDK KRFQKDLEER LNFEKMKLER
210 220 230 240 250
LDLKEDEYER LLEQKKLLSS KEKLNDKIAL ALEVLENTHK ITHALESVGH
260 270 280 290 300
SAEFLKSALL EASALLEKEQ AKLEECERLD IEKVLERLGM LSGIIKDYGS
310 320 330 340 350
IMHAKERLGH VKNELHNLKE IDSHCETYHK EIERLKTECL KLCEEISGFR
360 370 380 390 400
KEYLAGFNAL LSAKAKDLLL KSPSLVLEDA PMSEKGAQKL VLNLQNSQLE
410 420 430 440 450
TLSSGEYSRL RLAFMLLEME FLKDFKGVLV LDEMDSNLSG EESLAVSKAL
460 470 480 490 500
ETLSSHSQIF AISHQVHIPA LAKNHILVFK ENHKSLAKTL NNEERVLEIA
510 520
RMIGGSENIE SAISFAKEKL KAQE
Length:524
Mass (Da):59,565
Last modified:January 1, 1998 - v1
Checksum:i1F78EBFF0CFCE68A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000511 Genomic DNA. Translation: AAD08433.1.
PIRiA64694.
RefSeqiNP_208184.1. NC_000915.1.
WP_001204425.1. NC_018939.1.

Genome annotation databases

EnsemblBacteriaiAAD08433; AAD08433; HP_1393.
GeneIDi899903.
KEGGiheo:C694_07195.
hpy:HP1393.
PATRICi20594173. VBIHelPyl33062_1457.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000511 Genomic DNA. Translation: AAD08433.1.
PIRiA64694.
RefSeqiNP_208184.1. NC_000915.1.
WP_001204425.1. NC_018939.1.

3D structure databases

ProteinModelPortaliO25943.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-3217N.
IntActiO25943. 5 interactions.
MINTiMINT-173060.
STRINGi85962.HP1393.

Proteomic databases

PRIDEiO25943.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAD08433; AAD08433; HP_1393.
GeneIDi899903.
KEGGiheo:C694_07195.
hpy:HP1393.
PATRICi20594173. VBIHelPyl33062_1457.

Phylogenomic databases

eggNOGiCOG0497.
KOiK03631.
OMAiFMLLEME.
OrthoDBiEOG6WQD34.

Enzyme and pathway databases

BioCyciHPY:HP1393-MONOMER.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR003593. AAA+_ATPase.
IPR004604. DNA_recomb/repair_RecN.
IPR027417. P-loop_NTPase.
IPR003395. RecF/RecN/SMC_N.
[Graphical view]
PANTHERiPTHR11059. PTHR11059. 1 hit.
PfamiPF02463. SMC_N. 1 hit.
[Graphical view]
PIRSFiPIRSF003128. RecN. 1 hit.
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700392 / 26695.

Entry informationi

Entry nameiRECN_HELPY
AccessioniPrimary (citable) accession number: O25943
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: January 1, 1998
Last modified: July 22, 2015
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Helicobacter pylori
    Helicobacter pylori (strain 26695): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.