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Protein

RutC family protein HP_0944

Gene

HP_0944

Organism
Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. deaminase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciHPY:HP0944-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
RutC family protein HP_0944
Gene namesi
Ordered Locus Names:HP_0944
OrganismiHelicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Taxonomic identifieri85962 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
ProteomesiUP000000429: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 125125RutC family protein HP_0944PRO_0000170336Add
BLAST

Proteomic databases

PRIDEiO25598.

Interactioni

Protein-protein interaction databases

DIPiDIP-3595N.
IntActiO25598. 8 interactions.
MINTiMINT-160406.
STRINGi85962.HP0944.

Structurei

3D structure databases

ProteinModelPortaliO25598.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RutC family.Curated

Phylogenomic databases

eggNOGiCOG0251.
OMAiGSYFKEP.
OrthoDBiEOG6QVRPF.

Family and domain databases

Gene3Di3.30.1330.40. 1 hit.
InterProiIPR013813. Endoribo_LPSP/chorism_mut-like.
IPR006056. YjgF-like.
IPR019897. YjgF-like_CS.
IPR006175. YjgF/Yer057p/UK114.
[Graphical view]
PANTHERiPTHR11803. PTHR11803. 1 hit.
PfamiPF01042. Ribonuc_L-PSP. 1 hit.
[Graphical view]
SUPFAMiSSF55298. SSF55298. 1 hit.
TIGRFAMsiTIGR00004. TIGR00004. 1 hit.
PROSITEiPS01094. UPF0076. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O25598-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKEVIHSTLA PKAIGPYSQA IATNDLVFVS GQLGIDVSTG EFKGADIHSQ
60 70 80 90 100
TTQSMENIKA ILKEAGLGMD SVVKTTILLK SLDDFAVVNG IYGSYFTEPY
110 120
PARATFQVAK LPKDALVEIE AIAIK
Length:125
Mass (Da):13,373
Last modified:January 1, 1998 - v1
Checksum:i94218638ABB85CB8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000511 Genomic DNA. Translation: AAD07989.1.
PIRiH64637.
RefSeqiNP_207736.1. NC_000915.1.
YP_006934860.1. NC_018939.1.

Genome annotation databases

EnsemblBacteriaiAAD07989; AAD07989; HP_0944.
GeneIDi13870132.
899473.
KEGGiheo:C694_04860.
hpy:HP0944.
PATRICi20593191. VBIHelPyl33062_0981.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000511 Genomic DNA. Translation: AAD07989.1.
PIRiH64637.
RefSeqiNP_207736.1. NC_000915.1.
YP_006934860.1. NC_018939.1.

3D structure databases

ProteinModelPortaliO25598.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-3595N.
IntActiO25598. 8 interactions.
MINTiMINT-160406.
STRINGi85962.HP0944.

Proteomic databases

PRIDEiO25598.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAD07989; AAD07989; HP_0944.
GeneIDi13870132.
899473.
KEGGiheo:C694_04860.
hpy:HP0944.
PATRICi20593191. VBIHelPyl33062_0981.

Phylogenomic databases

eggNOGiCOG0251.
OMAiGSYFKEP.
OrthoDBiEOG6QVRPF.

Enzyme and pathway databases

BioCyciHPY:HP0944-MONOMER.

Family and domain databases

Gene3Di3.30.1330.40. 1 hit.
InterProiIPR013813. Endoribo_LPSP/chorism_mut-like.
IPR006056. YjgF-like.
IPR019897. YjgF-like_CS.
IPR006175. YjgF/Yer057p/UK114.
[Graphical view]
PANTHERiPTHR11803. PTHR11803. 1 hit.
PfamiPF01042. Ribonuc_L-PSP. 1 hit.
[Graphical view]
SUPFAMiSSF55298. SSF55298. 1 hit.
TIGRFAMsiTIGR00004. TIGR00004. 1 hit.
PROSITEiPS01094. UPF0076. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700392 / 26695.

Entry informationi

Entry nameiY944_HELPY
AccessioniPrimary (citable) accession number: O25598
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: January 1, 1998
Last modified: January 7, 2015
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Helicobacter pylori
    Helicobacter pylori (strain 26695): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.