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Protein

UPF0102 protein HP_0823

Gene

HP_0823

Organism
Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciHPY:HP0823-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0102 protein HP_0823
Gene namesi
Ordered Locus Names:HP_0823
OrganismiHelicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Taxonomic identifieri85962 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
Proteomesi
  • UP000000429 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 114114UPF0102 protein HP_0823PRO_0000167356Add
BLAST

Proteomic databases

PaxDbiO25499.
PRIDEiO25499.

Interactioni

Protein-protein interaction databases

DIPiDIP-3532N.
IntActiO25499. 8 interactions.
MINTiMINT-161390.
STRINGi85962.HP0823.

Structurei

3D structure databases

ProteinModelPortaliO25499.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0102 family.Curated

Phylogenomic databases

eggNOGiENOG41082UM. Bacteria.
COG0792. LUCA.
KOiK07460.
OMAiHKQKGLK.

Family and domain databases

Gene3Di3.40.1350.10. 1 hit.
HAMAPiMF_00048. UPF0102. 1 hit.
InterProiIPR011335. Restrct_endonuc-II-like.
IPR011856. tRNA_endonuc-like_dom.
IPR003509. UPF0102.
[Graphical view]
PfamiPF02021. UPF0102. 1 hit.
[Graphical view]
SUPFAMiSSF52980. SSF52980. 1 hit.

Sequencei

Sequence statusi: Complete.

O25499-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRFLNNKHRE KGLKAEEEAC GFLKSLGFEM VERNFFSQFG EIDIIALKKG
60 70 80 90 100
VLHFIEVKSG ENFDPIYAIT PSKLKKMIKT IRCYLSQKDP NSDFCIDALI
110
VKNGKFELLE NITF
Length:114
Mass (Da):13,168
Last modified:January 1, 1998 - v1
Checksum:i4E178EFD74C14B48
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000511 Genomic DNA. Translation: AAD07870.1.
PIRiG64622.
RefSeqiNP_207616.1. NC_000915.1.
WP_001211699.1. NC_018939.1.

Genome annotation databases

EnsemblBacteriaiAAD07870; AAD07870; HP_0823.
GeneIDi898897.
KEGGiheo:C694_04215.
hpy:HP0823.
PATRICi20592935. VBIHelPyl33062_0856.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000511 Genomic DNA. Translation: AAD07870.1.
PIRiG64622.
RefSeqiNP_207616.1. NC_000915.1.
WP_001211699.1. NC_018939.1.

3D structure databases

ProteinModelPortaliO25499.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-3532N.
IntActiO25499. 8 interactions.
MINTiMINT-161390.
STRINGi85962.HP0823.

Proteomic databases

PaxDbiO25499.
PRIDEiO25499.

Protocols and materials databases

DNASUi898897.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAD07870; AAD07870; HP_0823.
GeneIDi898897.
KEGGiheo:C694_04215.
hpy:HP0823.
PATRICi20592935. VBIHelPyl33062_0856.

Phylogenomic databases

eggNOGiENOG41082UM. Bacteria.
COG0792. LUCA.
KOiK07460.
OMAiHKQKGLK.

Enzyme and pathway databases

BioCyciHPY:HP0823-MONOMER.

Family and domain databases

Gene3Di3.40.1350.10. 1 hit.
HAMAPiMF_00048. UPF0102. 1 hit.
InterProiIPR011335. Restrct_endonuc-II-like.
IPR011856. tRNA_endonuc-like_dom.
IPR003509. UPF0102.
[Graphical view]
PfamiPF02021. UPF0102. 1 hit.
[Graphical view]
SUPFAMiSSF52980. SSF52980. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiY823_HELPY
AccessioniPrimary (citable) accession number: O25499
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 25, 2003
Last sequence update: January 1, 1998
Last modified: September 7, 2016
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Helicobacter pylori
    Helicobacter pylori (strain 26695): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.