O25499 (Y823_HELPY) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
UPF0102 protein HP_0823

Gene names

Ordered Locus Names:

HP_0823

Organism

Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori) [Reference proteome] [HAMAP]

Taxonomic identifier

85962 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter › Helicobacter pylori

Protein attributes

Sequence length	114 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the UPF0102 family.

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	nucleic acid phosphodiester bond hydrolysis Inferred from electronic annotation. Source: GOC
Molecular_function	nuclease activity Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 114	114	UPF0102 protein HP_0823 HAMAP-Rule MF_00048		PRO_0000167356

Sequences

	Sequence		Length	Mass (Da)
	O25499 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: 4E178EFD74C14B48	FASTA	114	13,168
	10 20 30 40 50 60 MRFLNNKHRE KGLKAEEEAC GFLKSLGFEM VERNFFSQFG EIDIIALKKG VLHFIEVKSG 70 80 90 100 110 ENFDPIYAIT PSKLKKMIKT IRCYLSQKDP NSDFCIDALI VKNGKFELLE NITF

References

[1]

"The complete genome sequence of the gastric pathogen Helicobacter pylori." Tomb J.-F., White O., Kerlavage A.R., Clayton R.A., Sutton G.G., Fleischmann R.D., Ketchum K.A., Klenk H.-P., Gill S.R., Dougherty B.A., Nelson K.E., Quackenbush J., Zhou L., Kirkness E.F., Peterson S.N., Loftus B.J., Richardson D.L., Dodson R.J. , Khalak H.G., Glodek A., McKenney K., FitzGerald L.M., Lee N., Adams M.D., Hickey E.K., Berg D.E., Gocayne J.D., Utterback T.R., Peterson J.D., Kelley J.M., Cotton M.D., Weidman J.F., Fujii C., Bowman C., Watthey L., Wallin E., Hayes W.S., Borodovsky M., Karp P.D., Smith H.O., Fraser C.M., Venter J.C. Nature 388:539-547(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700392 / 26695.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE000511 Genomic DNA. Translation: AAD07870.1.
PIR	G64622.
RefSeq	NP_207616.1. NC_000915.1. YP_006934737.1. NC_018939.1.
3D structure databases
ProteinModelPortal	O25499.
ModBase	Search...
Protein-protein interaction databases
DIP	DIP-3532N.
MINT	MINT-161390.
STRING	85962.HP0823.
Protocols and materials databases
DNASU	898897.
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAD07870; AAD07870; HP_0823.
GeneID	13870006. 898897.
KEGG	heo:C694_04215. hpy:HP0823.
PATRIC	20592935. VBIHelPyl33062_0856.
Phylogenomic databases
eggNOG	COG0792.
KO	K07460.
OMA	IDIIAFK.
ProtClustDB	PRK12497.
Family and domain databases
Gene3D	3.40.1350.10. 1 hit.
HAMAP	MF_00048. UPF0102.
InterPro	IPR011335. Restrct_endonuc-II-like. IPR011856. tRNA_endonuc-like_dom. IPR003509. UPF0102. [Graphical view]
Pfam	PF02021. UPF0102. 1 hit. [Graphical view]
SUPFAM	SSF52980. Restrict_endonuc_II-like_core. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Y823_HELPY

Accession

Primary (citable) accession number: O25499

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 25, 2003
Last sequence update:	January 1, 1998
Last modified:	May 1, 2013
This is version 67 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program