O25341 (O25341_HELPY) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Solute-binding signature and mitochondrial signature protein (AspB) EMBL AAD07687.1

Gene names

Ordered Locus Names:

HP_0624

Organism

Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)

Taxonomic identifier

85962 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter

Protein attributes

Sequence length	375 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 3EZS Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro transferase activity, transferring nitrogenous groups Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O25341 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: 262EE78985E66683	FASTA	375	43,125
	10 20 30 40 50 60 MTFEPYPFER LRALLKEITP KKRGLDLGIG EPQFETPKFI QDALKNHTHS LNIYPKSAFE 70 80 90 100 110 120 ESLRAAQRGF FKRRFKIELK ENELISTLGS REVLFNFPSF VLFDYQNPTI AYPNPFYQIY 130 140 150 160 170 180 EGAAKFIKAK SLLMPLTKEN DFTPSLNEKE LQEVDLVILN SPNNPTGRTL SLEELISWVK 190 200 210 220 230 240 LALKHDFILI NDECYSEIYE NTPPPSLLEA CMLAGNEAFK NVLVIHSLSK RSSAPGLRSG 250 260 270 280 290 300 FIAGDSRLLE KYKAFRAYLG YTSANAIQKA SEAAWLDDRH AEFFRNIYAN NLKLARKIFK 310 320 330 340 350 360 NTLIYPYSFY VYLPVQNGEN FAKTLYQNEG IITLPALYLG RNRIGADYVR LALVYDTPLL 370 EKPLEIIETY RENHA

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The complete genome sequence of the gastric pathogen Helicobacter pylori." Tomb J.-F., White O., Kerlavage A.R., Clayton R.A., Sutton G.G., Fleischmann R.D., Ketchum K.A., Klenk H.-P., Gill S.R., Dougherty B.A., Nelson K.E., Quackenbush J., Zhou L., Kirkness E.F., Peterson S.N., Loftus B.J., Richardson D.L., Dodson R.J. , Khalak H.G., Glodek A., McKenney K., FitzGerald L.M., Lee N., Adams M.D., Hickey E.K., Berg D.E., Gocayne J.D., Utterback T.R., Peterson J.D., Kelley J.M., Cotton M.D., Weidman J.F., Fujii C., Bowman C., Watthey L., Wallin E., Hayes W.S., Borodovsky M., Karp P.D., Smith H.O., Fraser C.M., Venter J.C. Nature 388:539-547(1997) [PubMed: 9252185] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700392 / 26695.
[2]	"Crystal structure of aminotransferase AspB (NP_207418.1) from HELICOBACTER PYLORI 26695 at 2.19 A resolution." Joint Center for Structural Genomics (JCSG) Submitted (OCT-2008) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.19 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AE000511 Genomic DNA. Translation: AAD07687.1.

PIR

H64597.

RefSeq

NP_207418.1. NC_000915.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3EZS	X-ray	2.19	A/B	1-375	[»]

ProteinModelPortal

O25341.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

899030.

GenomeReviews

Gene locus HP_0624 in contig AE000511_GR.

KEGG

hpy:HP0624.

NMPDR

fig|85962.1.peg.616.

PATRIC

20592531. VBIHelPyl33062_0654.

TIGR

HP_0624.

Phylogenomic databases

HOGENOM

HBG645860.

OMA

YTSANAI.

ProtClustDB

PRK05839.

Family and domain databases

InterPro

IPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase_major_dom.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]

Gene3D

G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit.
G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.

Pfam

PF00155. Aminotran_1_2. 1 hit.
[Graphical view]

SUPFAM

SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.

ProtoNet

Search...

Entry information

Entry name

O25341_HELPY

Accession

Primary (citable) accession number: O25341

Entry history

Integrated into UniProtKB/TrEMBL:	January 1, 1998
Last sequence update:	January 1, 1998
Last modified:	December 14, 2011
This is version 66 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)