O24885 (O24885_HELPY) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
GDP-D-mannose dehydratase (RfbD) EMBL AAD07112.1

Gene names

Ordered Locus Names:

HP_0044

Organism

Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)

Taxonomic identifier

85962 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter

Protein attributes

Sequence length	381 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	GDP-mannose metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular function	GDP-mannose 4,6-dehydratase activity Inferred from electronic annotation. Source: InterPro coenzyme binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O24885 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: B4E32F9B67F1748B	FASTA	381	43,925
	10 20 30 40 50 60 MKEKIALITG VTGQDGSYLA EYLLNLGYEV HGLKRRSSSI NTSRIDHLYE DLHSDHKRRF 70 80 90 100 110 120 FLHYGDMTDS SNLIHLIATT KPTEIYNLAA QSHVKVSFET PEYTANADGI GTLRILEAMR 130 140 150 160 170 180 ILGLEKKTRF YQASTSELYG EVLETPQNEN TPFNPRSPYA VAKMYAFYIT KNYREAYNLF 190 200 210 220 230 240 AVNGILFNHE SRVRGETFVT RKITRAASAI AYNLTDCLYL GNLDAKRDWG HAKDYVKMMH 250 260 270 280 290 300 LMLQAPIPQD YVIATGKTTS VRDFVKMSFE FIGINLEFQN TGIKEIGLIK SVDEKRANAL 310 320 330 340 350 360 KLNLSHLKKG QIVVRIDERY FRPTEVDLLL GDPTKAEKEL DWVREYDLKE LVKDMLEYDL 370 380 KECQKNLYLQ DGGYILRNFY E

References

[1]

"The complete genome sequence of the gastric pathogen Helicobacter pylori." Tomb J.-F., White O., Kerlavage A.R., Clayton R.A., Sutton G.G., Fleischmann R.D., Ketchum K.A., Klenk H.-P., Gill S.R., Dougherty B.A., Nelson K.E., Quackenbush J., Zhou L., Kirkness E.F., Peterson S.N., Loftus B.J., Richardson D.L., Dodson R.J. , Khalak H.G., Glodek A., McKenney K., FitzGerald L.M., Lee N., Adams M.D., Hickey E.K., Berg D.E., Gocayne J.D., Utterback T.R., Peterson J.D., Kelley J.M., Cotton M.D., Weidman J.F., Fujii C., Bowman C., Watthey L., Wallin E., Hayes W.S., Borodovsky M., Karp P.D., Smith H.O., Fraser C.M., Venter J.C. Nature 388:539-547(1997) [PubMed: 9252185] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700392 / 26695.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE000511 Genomic DNA. Translation: AAD07112.1.
PIR	D64525.
RefSeq	NP_206845.1. NC_000915.1.
3D structure databases
HSSP	HSSP built from PDB template 1DB3 based on UniProtKB P32054.
ProteinModelPortal	O24885.
SMR	O24885. Positions 3-366.
ModBase	Search...
Protein-protein interaction databases
MINT	MINT-4064005.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	899160.
GenomeReviews	Gene locus HP_0044 in contig AE000511_GR.
KEGG	hpy:HP0044.
NMPDR	fig|85962.1.peg.43.
PATRIC	20591287. VBIHelPyl33062_0045.
TIGR	HP_0044.
Phylogenomic databases
HOGENOM	HBG755066.
OMA	QDPHEKD.
ProtClustDB	CLSK510462.
Family and domain databases
InterPro	IPR001509. Epimerase_deHydtase. IPR006368. GDP_Man_deHydtase. IPR016040. NAD(P)-bd_dom. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KO	K01711.
PANTHER	PTHR10366:SF32. GDP_mann_dehyd. 1 hit.
Pfam	PF01370. Epimerase. 1 hit. [Graphical view]
TIGRFAMs	TIGR01472. Gmd. 1 hit.
ProtoNet	Search...

Entry information

Entry name

O24885_HELPY

Accession

Primary (citable) accession number: O24885

Entry history

Integrated into UniProtKB/TrEMBL:	January 1, 1998
Last sequence update:	January 1, 1998
Last modified:	December 14, 2011
This is version 55 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)