Mannose-6-phosphate isomerase (Pmi) or (AlgA) - Helicobacter pylori (strain ATCC 700392 / 26695)

Contribute

Send feedback

Read comments (?) or add your own

O24884 (O24884_HELPY) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 61. History...

Clusters with 100%, 90%, 50% identity |

Third-party data

text xml rdf/xml gff fasta

Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Submitted name:
Mannose-6-phosphate isomerase (Pmi) or (AlgA) EMBL AAD07111.1

Gene names

Ordered Locus Names:

HP_0043

Organism

Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)

Taxonomic identifier

85962 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter

Protein attributes

Sequence length	470 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the mannose-6-phosphate isomerase type 2 family. RuleBase RU004190

Ontologies

Keywords
Molecular function	Isomerase EMBL AAD07111.1
Technical term	3D-structure PDB 2QH5 Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	lipopolysaccharide biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	isomerase activity Inferred from electronic annotation. Source: UniProtKB-KW nucleotidyltransferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

O24884 [UniParc].

Last modified January 1, 1998. Version 1.
Checksum: 7D9F3FC322B757C6
Show »

FASTA

470

53,371

        10         20         30         40         50         60 
MKIKNILLSG GSGKRLWPLS RSLYPKQFLK LFDHKSLFEL SFKRNASLVD ETLIVCNEKH 

        70         80         90        100        110        120 
YFLALEEIKN EIKNKSVGFL LESLSKNTAN AIALSALMSD KEDLLIVTPS DHLIKDLQAY 

       130        140        150        160        170        180 
ENAIKKAIDL AQKGFLVTFG VSIDKPNTEF GYIESPNGLD VKRFIEKPSL DKAIEFQKSG 

       190        200        210        220        230        240 
GFYFNSGMFV FQAGVFLDEL KKHAPTILKG CERAFESLEN AYFFEKKIAR LSEKSMQDLE 

       250        260        270        280        290        300 
DMSIDIALMQ QSHKIKMVEL NAKWSDLGNF NALFEEAANE PKENVSLNQT PVFAKESENN 

       310        320        330        340        350        360 
LVFSHKVSAL LGVENLAVID TKDALLIAHK DKAKDLKALV NEVETNNQEL LQTHTKVYRP 

       370        380        390        400        410        420 
WGSYEVLHES GCYKVKILEV KPNARLSLQK HFHRSEHWVV ISGMASVELD HQLFELQANE 

       430        440        450        460        470 
STYIPKNTLH RLANYGKIPL IIIEVQVGEY VGEDDIVRID DDFNRQNQNA

« Hide

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The complete genome sequence of the gastric pathogen Helicobacter pylori." Tomb J.-F., White O., Kerlavage A.R., Clayton R.A., Sutton G.G., Fleischmann R.D., Ketchum K.A., Klenk H.-P., Gill S.R., Dougherty B.A., Nelson K.E., Quackenbush J., Zhou L., Kirkness E.F., Peterson S.N., Loftus B.J., Richardson D.L., Dodson R.J. Venter J.C. Nature 388:539-547(1997) [PubMed: 9252185] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700392 / 26695.
[2]	"Crystal structure of Mannose-6-phosphate isomerase from Helicobacter pylori." Patskovsky Y., Ramagopal U., Toro R., Sauder J.M., Iizuka M., Dickey M., Maletic M., Wasserman S.R., Koss J., Burley S.K., Almo S.C. Submitted (JUN-2007) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS) OF 2-298.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AE000511 Genomic DNA. Translation: AAD07111.1.

PIR

C64525.

RefSeq

NP_206844.1. NC_000915.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2QH5	X-ray	2.30	A/B	2-298	[»]

ProteinModelPortal

O24884.

SMR

O24884. Positions 1-266.

ModBase

Search...

Protein-protein interaction databases

DIP

DIP-3748N.

MINT

MINT-164598.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

899159.

GenomeReviews

Gene locus HP_0043 in contig AE000511_GR.

KEGG

hpy:HP0043.

NMPDR

fig|85962.1.peg.42.

PATRIC

20591285. VBIHelPyl33062_0044.

TIGR

HP_0043.

Phylogenomic databases

HOGENOM

HBG422488.

OMA

LQANEST.

ProtClustDB

CLSK495835.

Family and domain databases

InterPro

IPR011051. Cupin_RmlC_type.
IPR006375. Man1P_GuaTrfase/Man6P_Isoase.
IPR001538. Man6P_isomerase-2_C.
IPR005835. NTP_transferase.
IPR014710. RmlC-like_jellyroll.
[Graphical view]

Gene3D

G3DSA:2.60.120.10. RmlC-like_jellyroll. 1 hit.

K00971.

Pfam

PF01050. MannoseP_isomer. 1 hit.
PF00483. NTP_transferase. 1 hit.
[Graphical view]

SUPFAM

SSF51182. RmlC_like_cupin. 1 hit.

TIGRFAMs

TIGR01479. GMP_PMI. 1 hit.

ProtoNet

Search...

Entry information

Entry name

O24884_HELPY

Accession

Primary (citable) accession number: O24884

Entry history

Integrated into UniProtKB/TrEMBL:	January 1, 1998
Last sequence update:	January 1, 1998
Last modified:	December 14, 2011
This is version 61 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info

Preferred order of sections

Names and origin

Protein attributes

General annotation (Comments)

Ontologies

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Family and domain databases

Entry information