Reviewed, UniProtKB/Swiss-Prot O24876 (Y035_HELPY)

Names and origin

Protein names

Recommended name:
    UPF0133 protein HP_0035

Gene names

Ordered Locus Names:

HP_0035

Organism

Helicobacter pylori (Campylobacter pylori) [Complete proteome] [HAMAP]

Taxonomic identifier

210 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter

Protein attributes

Sequence length	97 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Subunit structure	Homodimer By similarity.
Sequence similarities	Belongs to the UPF0133 family.

Ontologies

Keywords
Technical term	3D-structure Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

1 – 97

97

UPF0133 protein HP_0035 HAMAP MF_00274

PRO_0000170399

Secondary structure

1

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97

Helix Strand Turn

Details...

Turn

3 – 5

3

Helix

14 – 25

12

Beta strand

29 – 32

4

Beta strand

38 – 42

5

Beta strand

48 – 53

6

Helix

55 – 59

5

Helix

61 – 73

13

Helix

77 – 90

14

Sequences

	Sequence		Length	Mass (Da)
	O24876-1 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: 11060AFF9957357D	FASTA	97	10,724
	10 20 30 40 50 60 MDFSQLGGLL DGMKKEFSQL EEKNKDTIHT SKSGGGMVSV SFNGLGELVD LQIDDSLLED 70 80 90 KEAMQIYLMS ALNDGYKAVE ENRKNLAFNM LGNFAKL

References

[1]

"The complete genome sequence of the gastric pathogen Helicobacter pylori." Tomb J.-F., White O., Kerlavage A.R., Clayton R.A., Sutton G.G., Fleischmann R.D., Ketchum K.A., Klenk H.-P., Gill S.R., Dougherty B.A., Nelson K.E., Quackenbush J., Zhou L., Kirkness E.F., Peterson S.N., Loftus B.J., Richardson D.L., Dodson R.J. , Khalak H.G., Glodek A., McKenney K., FitzGerald L.M., Lee N., Adams M.D., Hickey E.K., Berg D.E., Gocayne J.D., Utterback T.R., Peterson J.D., Kelley J.M., Cotton M.D., Weidman J.F., Fujii C., Bowman C., Watthey L., Wallin E., Hayes W.S., Borodovsky M., Karp P.D., Smith H.O., Fraser C.M., Venter J.C. Nature 388:539-547(1997) [PubMed: 9252185] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700392 / 26695.

Cross-references

Sequence databases

EMBLGenBankDDBJ

AE000511 Genomic DNA. Translation: AAD07104.1.

PIR

C64524.

RefSeq

NP_206837.1.

3D structure databases

PDBPDBe

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3F42	X-ray	1.78	A/B	1-97	[»]

ModBase

Search...

Protein-protein interaction databases

DIP

DIP-3108N.

Genome annotation databases

GeneID

899143.

GenomeReviews

Gene locus HP_0035 in contig AE000511_GR.

KEGG

hpy:HP0035.

NMPDR

fig|85962.1.peg.35.

TIGR

HP_0035.

Phylogenomic databases

HOGENOM

HBG734215.

OMA

QIYLMSA.

Family and domain databases

HAMAP

MF_00274.
[Tree]

InterPro

IPR004401. UPF0133.
[Graphical view]

Gene3D

G3DSA:3.30.1310.10. CHP103. 1 hit.

Pfam

PF02575. DUF149. 1 hit.
[Graphical view]

PIRSF

PIRSF004555. UCP004555. 1 hit.

ProtoNet

Search...

Entry information

Entry name

Y035_HELPY

Accession

Primary (citable) accession number: O24876

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 1, 2000
Last sequence update:	January 1, 1998
Last modified:	December 15, 2009
This is version 53 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)