Reviewed, UniProtKB/Swiss-Prot O24853 (NUSB_HELPY)

Names and origin

Protein names

Recommended name:
    N utilization substance protein B homolog
      Short name=Protein nusB

Gene names

Name:	nusB
Ordered Locus Names:	HP_0001

Organism

Helicobacter pylori (Campylobacter pylori) [Complete proteome] [HAMAP]

Taxonomic identifier

210 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter

Protein attributes

Sequence length	138 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Involved in the transcription termination process By similarity.
Sequence similarities	Belongs to the nusB family.

Ontologies

Keywords
Biological process	Transcription Transcription regulation Transcription termination
Ligand	RNA-binding
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro transcription termination Inferred from electronic annotation. Source: HAMAP
Molecular function	RNA binding Inferred from electronic annotation. Source: UniProtKB-KW transcription termination factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 138	138	N utilization substance protein B homolog HAMAP MF_00073		PRO_0000176545

Sequences

	Sequence		Length	Mass (Da)
	O24853-1 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: 4321C874F2064C84	FASTA	138	15,521
	10 20 30 40 50 60 MATRTQARGA VVELLYAFES GNEEIKKIAS SMLEEKKIKN NQLAFALSLF NGVLEKINEI 70 80 90 100 110 120 DALIEPHLKD WDFKRLGSME KAILRLGAYE IGFTPTQNPI IINECIELGK LYAEPNTPKF 130 LNAILDSLSK KLTQKPLN

References

[1]

"The complete genome sequence of the gastric pathogen Helicobacter pylori." Tomb J.-F., White O., Kerlavage A.R., Clayton R.A., Sutton G.G., Fleischmann R.D., Ketchum K.A., Klenk H.-P., Gill S.R., Dougherty B.A., Nelson K.E., Quackenbush J., Zhou L., Kirkness E.F., Peterson S.N., Loftus B.J., Richardson D.L., Dodson R.J. , Khalak H.G., Glodek A., McKenney K., FitzGerald L.M., Lee N., Adams M.D., Hickey E.K., Berg D.E., Gocayne J.D., Utterback T.R., Peterson J.D., Kelley J.M., Cotton M.D., Weidman J.F., Fujii C., Bowman C., Watthey L., Wallin E., Hayes W.S., Borodovsky M., Karp P.D., Smith H.O., Fraser C.M., Venter J.C. Nature 388:539-547(1997) [PubMed: 9252185] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700392 / 26695.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE000511 Genomic DNA. Translation: AAD07074.1.
PIR	A64520.
RefSeq	NP_206803.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
DIP	DIP-3047N.
Genome annotation databases
GeneID	898756.
GenomeReviews	Gene locus HP_0001 in contig AE000511_GR.
KEGG	hpy:HP0001.
NMPDR	fig|85962.1.peg.1.
TIGR	HP_0001.
Phylogenomic databases
HOGENOM	HBG734409.
OMA	SHNDIAD.
Family and domain databases
HAMAP	MF_00073. [Tree]
InterPro	IPR011605. NusB_fam. IPR006027. NusB_RsmB_TIM44. [Graphical view]
Gene3D	G3DSA:1.10.940.10. NusB_RsmB_TIM44. 1 hit.
Pfam	PF01029. NusB. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

NUSB_HELPY

Accession

Primary (citable) accession number: O24853

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 30, 2000
Last sequence update:	January 1, 1998
Last modified:	December 15, 2009
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)