O24852 (O24852_AERPU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: Xylanase D EMBL AAB63573.1
Organism	Aeromonas punctata (Aeromonas caviae) EMBL AAB63573.1
Taxonomic identifier	648 [NCBI]
Taxonomic lineage	Bacteria › Proteobacteria › Gammaproteobacteria › Aeromonadales › Aeromonadaceae › Aeromonas

Protein attributes

Sequence length	564 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Xylan degradation EMBL AAB63573.1
Gene Ontology (GO)
Biological process	lysosome organization Inferred from electronic annotation. Source: InterPro sphingolipid metabolic process Inferred from electronic annotation. Source: InterPro xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	lysosome Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro glucosylceramidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O24852 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: E8F3D289793C7154	FASTA	564	62,123
	10 20 30 40 50 60 MKVVKFKFKK TINVLLACLT ALPLMLSPTQ VSAASDANIN LSSEKQLIKG FGGINLPAWI 70 80 90 100 110 120 GDLTPAQRET AFGNDQNQLG FSILRIYVDP DSNNWYREVA TAKRAIEKGA IVFASPWNPP 130 140 150 160 170 180 SSMVETFNRN GDTNAKRLKY DKYAAYAQHL NDFVTYMKNN GVDLYAISVQ NEPDYAHDWT 190 200 210 220 230 240 WWTPQEILRF MKENAGSIQG TKVMAPESFQ YLKNISDPIL NDPQALANMD ILGAHTYGTQ 250 260 270 280 290 300 ISNFAYPLFK QKGAGKELWM TEVYVPNSDN NSADRWPEAL EVSYHMHNAM VEGDFQAYVW 310 320 330 340 350 360 WYIRRQYGPM KEDGTISKRG YNMAHFSKFV RPGYLRVDAT KNPDTNTFVS AYKGDNKVVV 370 380 390 400 410 420 VAINRGTSAT SQRFVLQNGN ASTVSSYVTD SSRNLASLAP INVSNGAFTA QLPAQSVTTF 430 440 450 460 470 480 VADLTGGNGG GNVGTGTTYE AETGTTLTDA VIETLYPGYT GSGYVNFNAY TGSAIQWNNI 490 500 510 520 530 540 NNTISGTKNV KFRYAQESGT RNLDIYVNGT KVLSNEPFTA TGSWSTWGEK TIQVPMNSGV 550 560 NTLRIVTTGT EGPNIDSINV TAAQ

References

[1]

"Cloning and expression of a 58-kDa xylanase VI gene (xynD) of Aeromonas caviae ME-1 in Escherichia coli which is not categorized as a family F or family G xylanase." Suzuki T., Ibata K., Hatsu M., Takamizawa K., Kawai K. J. Ferment. Bioeng. 84:86-89(1997) Cited for: NUCLEOTIDE SEQUENCE. Strain: ME-1 EMBL AAB63573.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U86340 Genomic DNA. Translation: AAB63573.1.
3D structure databases
ProteinModelPortal	O24852.
ModBase	Search...
Protein family/group databases
CAZy	CBM35. Carbohydrate-Binding Module Family 35. GH5. Glycoside Hydrolase Family 5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR005084. CMB_fam6. IPR008979. Galactose-bd-like. IPR013780. Glyco_hydro_13_b. IPR001139. Glyco_hydro_30. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHER	PTHR11069. Glyco_hydro_30. 1 hit.
Pfam	PF03422. CBM_6. 1 hit. PF02055. Glyco_hydro_30. 2 hits. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS51175. CBM6. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

O24852_AERPU

Accession

Primary (citable) accession number: O24852

Entry history

Integrated into UniProtKB/TrEMBL:	January 1, 1998
Last sequence update:	January 1, 1998
Last modified:	May 31, 2011
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)