Reviewed,
UniProtKB/Swiss-Prot O24748 (Y2153_CORGL)
Last modified
November 24, 2009.
Version 57.
History...
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: UPF0001 protein Cgl2153/cg2364 | ||
| Gene names |
| ||
| Organism | Corynebacterium glutamicum (Brevibacterium flavum) [Complete proteome] [HAMAP] | ||
| Taxonomic identifier | 1718 [NCBI] | ||
| Taxonomic lineage | Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Corynebacteriaceae › Corynebacterium |
Protein attributes
| Sequence length | 221 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Cofactor | Pyridoxal phosphate By similarity. |
| Sequence similarities | Belongs to the UPF0001 family. |
Ontologies
| Keywords | |
|---|---|
| Ligand | Pyridoxal phosphate |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| None. [Check GOA] | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 221 | 221 | UPF0001 protein Cgl2153/cg2364 | PRO_0000163194 | |||||
Amino acid modifications | |||||||||
| Modified residue | 26 | 1 | N6-(pyridoxal phosphate)lysine By similarity | ||||||
Experimental info | |||||||||
| Sequence conflict | 39 | 1 | F → L in BAA21689. Ref.1 | ||||||
| Sequence conflict | 82 | 1 | A → S in BAA21689. Ref.1 | ||||||
| Sequence conflict | 106 | 1 | D → E in BAA21689. Ref.1 | ||||||
| Sequence conflict | 164 | 1 | G → D in BAA21689. Ref.1 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Cloning, sequencing, and characterization of the ftsZ gene from coryneform bacteria." Kobayashi M., Asai Y., Hatakeyama K., Kijima N., Wachi M., Nagai K., Yukawa H. Biochem. Biophys. Res. Commun. 236:383-388(1997) [PubMed: 9240446] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [2] | "Complete genomic sequence of Corynebacterium glutamicum ATCC 13032." Nakagawa S. Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025. |
| [3] | "The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins." Kalinowski J., Bathe B., Bartels D., Bischoff N., Bott M., Burkovski A., Dusch N., Eggeling L., Eikmanns B.J., Gaigalat L., Goesmann A., Hartmann M., Huthmacher K., Kraemer R., Linke B., McHardy A.C., Meyer F., Moeckel B. Tauch A.J. Biotechnol. 104:5-25(2003) [PubMed: 12948626] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025. |
Cross-references
Sequence databases | |
|---|---|
| AB003132 Genomic DNA. Translation: BAA21689.1. BA000036 Genomic DNA. Translation: BAB99546.1. BX927154 Genomic DNA. Translation: CAF20493.1. Different initiation. | |
| RefSeq | NP_601355.1. YP_226394.1. |
3D structure databases | |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 1020105. 3343194. |
| GenomeReviews | Gene locus Cgl2153 in contig BA000036_GR. Gene locus cg2364 in contig BX927147_GR. |
| KEGG | cgb:cg2364. cgl:NCgl2073. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | O24748. |
| OMA | HGSTMVR |
Enzyme and pathway databases | |
| BioCyc | CGLU196627:CG2364-MON. |
Family and domain databases | |
| InterPro | IPR001608. Ala_racemase_N. IPR011078. Prd-pyrdxlP-dep_enz_YBL036C. [Graphical view] |
| PANTHER | PTHR10146. PP_YBL036C. 1 hit. |
| Pfam | PF01168. Ala_racemase_N. 1 hit. [Graphical view] |
| PIRSF | PIRSF004848. YBL036c_PLPDEIII. 1 hit. |
| TIGRFAMs | TIGR00044. PP_YBL036C. 1 hit. |
| PROSITE | PS01211. UPF0001. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Y2153_CORGL | ||||||||
| Accession | Primary (citable) accession number: O24748 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| SIMILARITY comments Index of protein domains and families |
| Uncharacterized protein families (UPF) List of uncharacterized protein family (UPF) entries |

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