UPF0001 protein Cgl2153/cg2364 - Corynebacterium glutamicum

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Reviewed, UniProtKB/Swiss-Prot O24748 (Y2153_CORGL)

Last modified November 24, 2009. Version 57. History...

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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein names

Recommended name:
UPF0001 protein Cgl2153/cg2364

Gene names

Ordered Locus Names:

Cgl2153, cg2364

Organism

Corynebacterium glutamicum (Brevibacterium flavum) [Complete proteome] [HAMAP]

Taxonomic identifier

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Corynebacteriaceae › Corynebacterium

Protein attributes

Sequence length	221 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity.
Sequence similarities	Belongs to the UPF0001 family.

Ontologies

Keywords
Ligand	Pyridoxal phosphate
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

221

UPF0001 protein Cgl2153/cg2364

PRO_0000163194

Amino acid modifications

Modified residue

1

N6-(pyridoxal phosphate)lysine By similarity

Experimental info

Sequence conflict

1

F → L in BAA21689. Ref.1

Sequence conflict

1

A → S in BAA21689. Ref.1

Sequence conflict

1

D → E in BAA21689. Ref.1

Sequence conflict

1

G → D in BAA21689. Ref.1

Sequences

Sequence

Length

Mass (Da)

Tools

O24748-1 [UniParc].

Last modified July 11, 2002. Version 2.
Checksum: D97FEB437CC947FD
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221

23,975

        10         20         30         40         50         60 
MQARIDATLN EHNRPEGSVR LLPVTKFHPV EDIKILQEFG VTAVGENREQ EARAKALELP 

        70         80         90        100        110        120 
DMDFHMIGQI QSKKANSIAR WAAAVHSVDS EKIAEALGRG VALALDRGDR TSDELPCFIQ 

       130        140        150        160        170        180 
LSLDGDPSRG GTPLSQVTQL ADCISDTTHL RFEGLMCVPP LGWGPEKAFS QARDVLSGLE 

       190        200        210        220 
EHFDRSLEFS AGMSGDLVAA IKHGSTIVRV GTEILGNRPL A

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Cloning, sequencing, and characterization of the ftsZ gene from coryneform bacteria." Kobayashi M., Asai Y., Hatakeyama K., Kijima N., Wachi M., Nagai K., Yukawa H. Biochem. Biophys. Res. Commun. 236:383-388(1997) [PubMed: 9240446] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]	"Complete genomic sequence of Corynebacterium glutamicum ATCC 13032." Nakagawa S. Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025.
[3]	"The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins." Kalinowski J., Bathe B., Bartels D., Bischoff N., Bott M., Burkovski A., Dusch N., Eggeling L., Eikmanns B.J., Gaigalat L., Goesmann A., Hartmann M., Huthmacher K., Kraemer R., Linke B., McHardy A.C., Meyer F., Moeckel B. Tauch A. J. Biotechnol. 104:5-25(2003) [PubMed: 12948626] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025.

Cross-references

Sequence databases
	AB003132 Genomic DNA. Translation: BAA21689.1. BA000036 Genomic DNA. Translation: BAB99546.1. BX927154 Genomic DNA. Translation: CAF20493.1. Different initiation.
RefSeq	NP_601355.1. YP_226394.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	1020105. 3343194.
GenomeReviews	Gene locus Cgl2153 in contig BA000036_GR. Gene locus cg2364 in contig BX927147_GR.
KEGG	cgb:cg2364. cgl:NCgl2073.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	O24748.
OMA	HGSTMVR
Enzyme and pathway databases
BioCyc	CGLU196627:CG2364-MON.
Family and domain databases
InterPro	IPR001608. Ala_racemase_N. IPR011078. Prd-pyrdxlP-dep_enz_YBL036C. [Graphical view]
PANTHER	PTHR10146. PP_YBL036C. 1 hit.
Pfam	PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PIRSF	PIRSF004848. YBL036c_PLPDEIII. 1 hit.
TIGRFAMs	TIGR00044. PP_YBL036C. 1 hit.
PROSITE	PS01211. UPF0001. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y2153_CORGL

Accession

Primary (citable) accession number: O24748

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 15, 1998
Last sequence update:	July 11, 2002
Last modified:	November 24, 2009
This is version 57 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

SIMILARITY comments

Index of protein domains and families

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents