Unreviewed, UniProtKB/TrEMBL O24654 (O24654_ARATH)

Names and origin

Protein names

Submitted name:
    Putative endochitinase EMBL AAB64046.1

Gene names

Ordered Locus Names:

At2g43600 EMBL AAB64046.1 TAIR At2g43600

Organism

Arabidopsis thaliana (Mouse-ear cress) [Complete proteome]

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis

Protein attributes

Sequence length	273 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Sequence similarities

Contains 1 chitin-binding type-1 domain. RuleBase RU000410V1

Ontologies

Keywords
Ligand	Chitin-binding RuleBase RU000410V1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro chitin catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	chitin binding Inferred from electronic annotation. Source: InterPro chitinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O24654-1 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: C8096D4C6B13FD2F	FASTA	273	30,920
	10 20 30 40 50 60 MTIKNVIFSL FILAILAETV FSQNCMDTSC PGLKECCSRW GFCGTKDEYC GFFCFSGPCN 70 80 90 100 110 120 IKGKSYGYDY NVDAGPRGKI ETVITSALFD SIMSKVESNC SAKGFYTYEA FITAFKSFGA 130 140 150 160 170 180 YKGKVAKREI AAILAHFSYG SKSFCYKEEI SNERYCSKSK KYPCEPGKNY YGRGLLQSIT 190 200 210 220 230 240 WNEYYGAGKH LGLPLLKDPD LVSRSPEVAF KFAMWFWNRN VRPALYLGFG EITKRVDGRE 250 260 270 CGNWRRDDTK NKVKQYIEFC EMLGVTPDQG LDC

References

[1]	Rounsley S.D., Lin X., Ketchum K.A., Crosby M.L., Brandon R.C., Spriggs T.A., Mason T.M., Kerlavage A.R., Adams M.D., Somerville C.R., Venter J.C. Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[2]	Town C.D., Kaul S. Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	Rounsley S.D., Tschudy M.M., Lin X., Ketchum K.A., Crosby M.L., Brandon R.C., Spriggs T.A., Mason T.M., Kerlavage A.R., Adams M.D., Somerville C.R., Venter J.C. Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AC002333 Genomic DNA. Translation: AAB64046.1. AC002335 Genomic DNA. Translation: AAM14809.1.
IPI	IPI00545989.
PIR	B84868.
RefSeq	NP_181888.1.
UniGene	At.66342
3D structure databases
HSSP	HSSP built from PDB template 1Q9B based on UniProtKB P02877.
ModBase	Search...
Protein family/group databases
CAZy	CBM18. Carbohydrate-Binding Module Family 18. GH19. Glycoside Hydrolase Family 19.
Genome annotation databases
GeneID	818962.
GenomeReviews	Gene locus AT2G43600 in contig CT485783_GR.
KEGG	ath:AT2G43600.
NMPDR	fig|3702.1.peg.11517.
Organism-specific databases
TAIR	At2g43600.
Gene expression databases
ArrayExpress	O24654.
Family and domain databases
InterPro	IPR018371. Chitin-binding_1_CS. IPR001002. Chitin_bd_1. IPR016283. Glyco_hydro_19. IPR000726. Glyco_hydro_19_cat. [Graphical view]
PANTHER	PTHR22595. Glyco_hydro_19_cat. 1 hit.
Pfam	PF00182. Glyco_hydro_19. 1 hit. [Graphical view]
PIRSF	PIRSF001060. Endochitinase. 1 hit.
ProDom	PD000609. Chitin_binding_1. 1 hit. PD354900. Glyco_hydro_19. 1 hit. [Graphical view] [Entries sharing at least one domain]
SMART	SM00270. ChtBD1. 1 hit. [Graphical view]
PROSITE	PS00026. CHIT_BIND_I_1. 1 hit. PS50941. CHIT_BIND_I_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

O24654_ARATH

Accession

Primary (citable) accession number: O24654

Entry history

Integrated into UniProtKB/TrEMBL:	January 1, 1998
Last sequence update:	January 1, 1998
Last modified:	April 14, 2009
This is version 56 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)