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O24603

- O24603_ARATH

UniProt

O24603 - O24603_ARATH

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Protein
Submitted name: Chitinase class 4-like protein
Gene
CHI, At2g43570
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. chitin binding Source: UniProtKB-KW
  2. chitinase activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
  2. cell wall macromolecule catabolic process Source: InterPro
  3. chitin catabolic process Source: InterPro
Complete GO annotation...

Keywords - Ligandi

Chitin-bindingUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciARA:AT2G43570-MONOMER.

Protein family/group databases

CAZyiCBM18. Carbohydrate-Binding Module Family 18.
GH19. Glycoside Hydrolase Family 19.

Names & Taxonomyi

Protein namesi
Submitted name:
Chitinase class 4-like proteinImported
Submitted name:
Endochitinase isologImported
Submitted name:
Putative endochitinaseImported
Gene namesi
Name:CHIImported
Ordered Locus Names:At2g43570Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 2

Organism-specific databases

TAIRiAT2G43570.

Subcellular locationi

GO - Cellular componenti

  1. apoplast Source: TAIR
  2. plant-type cell wall Source: TAIR
Complete GO annotation...

PTM / Processingi

Keywords - PTMi

Disulfide bondSAAS annotations

Expressioni

Gene expression databases

GenevestigatoriO24603.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G43570.1-P.

Family & Domainsi

Sequence similaritiesi

Contains 1 chitin-binding type-1 domain.UniRule annotation

Phylogenomic databases

eggNOGiCOG3979.
HOGENOMiHOG000231411.
InParanoidiO24603.
KOiK01183.
OMAiYRAKNAN.

Family and domain databases

Gene3Di3.30.60.10. 1 hit.
InterProiIPR001002. Chitin-bd_1.
IPR018371. Chitin-binding_1_CS.
IPR016283. Glyco_hydro_19.
IPR000726. Glyco_hydro_19_cat.
IPR023346. Lysozyme-like_dom.
[Graphical view]
PfamiPF00187. Chitin_bind_1. 1 hit.
PF00182. Glyco_hydro_19. 1 hit.
[Graphical view]
PIRSFiPIRSF001060. Endochitinase. 1 hit.
ProDomiPD000609. Chitin_bd_1. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTiSM00270. ChtBD1. 1 hit.
[Graphical view]
SUPFAMiSSF53955. SSF53955. 1 hit.
SSF57016. SSF57016. 1 hit.
PROSITEiPS00026. CHIT_BIND_I_1. 1 hit.
PS50941. CHIT_BIND_I_2. 1 hit.
PS00773. CHITINASE_19_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O24603-1 [UniParc]FASTAAdd to Basket

« Hide

MAKPTSRNDR FALFFITLIF LILTVSKPVA SQNCGCASDF CCSKYGYCGT    50
TDEFCGEGCQ AGPCRSSGGG GDPAVSLEGT VTPDFFNSIL NQRGDCPGKG 100
FYTHDTFMAA ANSYPSFGAS ISKREIAAFF AHVAQETGFM CYIEEIDGPA 150
KAASGEYCDT EKPEFPCAQG KGYYGRGAIQ LSWNYNYGLC GKALDENLLA 200
SPEKVAQDQV LAFKTAFWFW TTNVRTSFKS GFGATIRAVN SRECSGGDST 250
AKAANRIKYF QDYCGKLGVA PGDNLTC 277
Length:277
Mass (Da):29,775
Last modified:January 1, 1998 - v1
Checksum:i0D0910C34F5E0AA5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC002333 Genomic DNA. Translation: AAB64049.1.
AC002335 Genomic DNA. Translation: AAM14808.1.
AY099810 mRNA. Translation: AAM20661.1.
BT003417 mRNA. Translation: AAO30080.1.
CP002685 Genomic DNA. Translation: AEC10291.1.
AK226201 mRNA. Translation: BAE98366.1.
PIRiG84867.
RefSeqiNP_181885.1. NM_129919.4.
UniGeneiAt.36876.

Genome annotation databases

EnsemblPlantsiAT2G43570.1; AT2G43570.1; AT2G43570.
GeneIDi818959.
KEGGiath:AT2G43570.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC002333 Genomic DNA. Translation: AAB64049.1 .
AC002335 Genomic DNA. Translation: AAM14808.1 .
AY099810 mRNA. Translation: AAM20661.1 .
BT003417 mRNA. Translation: AAO30080.1 .
CP002685 Genomic DNA. Translation: AEC10291.1 .
AK226201 mRNA. Translation: BAE98366.1 .
PIRi G84867.
RefSeqi NP_181885.1. NM_129919.4.
UniGenei At.36876.

3D structure databases

ModBasei Search...

Protein-protein interaction databases

STRINGi 3702.AT2G43570.1-P.

Protein family/group databases

CAZyi CBM18. Carbohydrate-Binding Module Family 18.
GH19. Glycoside Hydrolase Family 19.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT2G43570.1 ; AT2G43570.1 ; AT2G43570 .
GeneIDi 818959.
KEGGi ath:AT2G43570.

Organism-specific databases

TAIRi AT2G43570.

Phylogenomic databases

eggNOGi COG3979.
HOGENOMi HOG000231411.
InParanoidi O24603.
KOi K01183.
OMAi YRAKNAN.

Enzyme and pathway databases

BioCyci ARA:AT2G43570-MONOMER.

Gene expression databases

Genevestigatori O24603.

Family and domain databases

Gene3Di 3.30.60.10. 1 hit.
InterProi IPR001002. Chitin-bd_1.
IPR018371. Chitin-binding_1_CS.
IPR016283. Glyco_hydro_19.
IPR000726. Glyco_hydro_19_cat.
IPR023346. Lysozyme-like_dom.
[Graphical view ]
Pfami PF00187. Chitin_bind_1. 1 hit.
PF00182. Glyco_hydro_19. 1 hit.
[Graphical view ]
PIRSFi PIRSF001060. Endochitinase. 1 hit.
ProDomi PD000609. Chitin_bd_1. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
SMARTi SM00270. ChtBD1. 1 hit.
[Graphical view ]
SUPFAMi SSF53955. SSF53955. 1 hit.
SSF57016. SSF57016. 1 hit.
PROSITEi PS00026. CHIT_BIND_I_1. 1 hit.
PS50941. CHIT_BIND_I_2. 1 hit.
PS00773. CHITINASE_19_1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. Cited for: NUCLEOTIDE SEQUENCE.
  3. Cited for: NUCLEOTIDE SEQUENCE.
  4. Town C.D., Kaul S.
    Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  5. Cited for: NUCLEOTIDE SEQUENCE.
  6. Palm C.J., Davis R.W.
    Submitted (OCT-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  7. Cited for: NUCLEOTIDE SEQUENCE.
  8. "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs."
    Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K.
    , Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K.
    Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  9. TAIR
    Swarbreck D., Lamesch P., Wilks C., Huala E.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  10. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.

Entry informationi

Entry nameiO24603_ARATH
AccessioniPrimary (citable) accession number: O24603
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: September 3, 2014
This is version 107 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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