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Protein
Submitted name:

Class IV endochitinase

Gene

Chi4B

Organism
Vitis vinifera (Grape)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseImported, Hydrolase
LigandChitin-bindingPROSITE-ProRule annotation

Protein family/group databases

CAZyiCBM18. Carbohydrate-Binding Module Family 18.
GH19. Glycoside Hydrolase Family 19.

Names & Taxonomyi

Protein namesi
Submitted name:
Class IV endochitinaseImported (EC:3.2.1.14Imported)
Gene namesi
Name:Chi4BImported
OrganismiVitis vinifera (Grape)Imported
Taxonomic identifieri29760 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis

Pathology & Biotechi

Protein family/group databases

Allergomei946. Vit v 5.

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi20 ↔ 32UniRule annotation
Disulfide bondi25 ↔ 39UniRule annotation
Disulfide bondi78 ↔ 127UniRule annotation
Disulfide bondi140 ↔ 149UniRule annotation
Disulfide bondi227 ↔ 259UniRule annotation

Keywords - PTMi

Disulfide bondUniRule annotationSAAS annotation

Proteomic databases

PRIDEiO24531.

Structurei

3D structure databases

ProteinModelPortaliO24531.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini15 – 50Chitin-binding type-1InterPro annotationAdd BLAST36

Phylogenomic databases

eggNOGiKOG4742. Eukaryota.
COG3979. LUCA.

Family and domain databases

CDDicd00325. chitinase_glyco_hydro_19. 1 hit.
Gene3Di3.30.60.10. 1 hit.
InterProiView protein in InterPro
IPR001002. Chitin-bd_1.
IPR016283. Glyco_hydro_19.
IPR000726. Glyco_hydro_19_cat.
IPR023346. Lysozyme-like_dom.
PfamiView protein in Pfam
PF00187. Chitin_bind_1. 1 hit.
PF00182. Glyco_hydro_19. 2 hits.
PIRSFiPIRSF001060. Endochitinase. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD000609. Chitin_bd_1. 1 hit.
SMARTiView protein in SMART
SM00270. ChtBD1. 1 hit.
SUPFAMiSSF53955. SSF53955. 1 hit.
SSF57016. SSF57016. 1 hit.
PROSITEiView protein in PROSITE
PS50941. CHIT_BIND_I_2. 1 hit.
PS00773. CHITINASE_19_1. 1 hit.

Sequencei

Sequence statusi: Fragment.

O24531-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
LTVLLVGALF GAAVAQNCGC ASGLCCSKYG YRGTGSDYCG DGCQSGPCDS
60 70 80 90 100
GSGSGSSVSD IVTQAFFDGI INQAASSCAG KNFYTRAAFL SALNSYSGFG
110 120 130 140 150
NDGSTDANKR EIAAFFAHVT HETGHFCYIE EINGASHNYC DSSNTQYPCV
160 170 180 190 200
SGQNYYGRGP LQLTWNYNYG AAGNSIGFNG LSNPGIVATD VVTSFKTALW
210 220 230 240 250
FWMNNVHSVL SQGFGATIQA INGAVECNGG NTAAVNARVQ YYKDYCSQLG

VSPGDNLTC
Length:259
Mass (Da):27,023
Last modified:March 15, 2017 - v2
Checksum:iFC888C5CDB0ECFE1
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U97522 mRNA. Translation: AAB65777.2.
UniGeneiVvi.119.
Vvi.8171.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiO24531_VITVI
AccessioniPrimary (citable) accession number: O24531
Entry historyiIntegrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: March 15, 2017
Last modified: July 5, 2017
This is version 89 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation