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Protein
Submitted name:

Putative MADS box transcription factor PrMADS6

Gene
N/A
Organism
Pinus radiata (Monterey pine) (Pinus insignis)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative MADS box transcription factor PrMADS6Imported
OrganismiPinus radiata (Monterey pine) (Pinus insignis)Imported
Taxonomic identifieri3347 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaPinidaePinalesPinaceaePinusPinus

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

ProteinModelPortaliO24490
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 61MADS-boxInterPro annotationAdd BLAST61
Domaini87 – 177K-boxInterPro annotationAdd BLAST91

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili80 – 114Sequence analysisAdd BLAST35

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

CDDicd00265 MADS_MEF2_like, 1 hit
Gene3Di3.40.1810.10, 1 hit
InterProiView protein in InterPro
IPR033896 MADS_MEF2-like
IPR002487 TF_Kbox
IPR002100 TF_MADSbox
IPR036879 TF_MADSbox_sf
PfamiView protein in Pfam
PF01486 K-box, 1 hit
PF00319 SRF-TF, 1 hit
PRINTSiPR00404 MADSDOMAIN
SMARTiView protein in SMART
SM00432 MADS, 1 hit
SUPFAMiSSF55455 SSF55455, 1 hit
PROSITEiView protein in PROSITE
PS51297 K_BOX, 1 hit
PS00350 MADS_BOX_1, 1 hit
PS50066 MADS_BOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

O24490-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARGKTQMRK IESATSRQVT FSKRRNGLLK KAYEMSVLCD AQLGLIVFSP
60 70 80 90 100
RGKVYEFSST CMQKMLARYE NFSEGSKATS TAKEQDVQGL KRQIANMEER
110 120 130 140 150
IEILESMHRK MLGDELASCA LKDLNELESQ VERGLRNVRA RKTEILVTEI
160 170 180 190 200
EQLQRKEWIL SEENAFLGKK FVHPHSVSKT PGSESGSIQN SEVETQLVMR
210
PPCTNAHFLI NSSH
Length:214
Mass (Da):24,325
Last modified:January 1, 1998 - v1
Checksum:iD5185BD7F14D67ED
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U90347 mRNA Translation: AAB80809.1
PIRiT10776

Similar proteinsi

Entry informationi

Entry nameiO24490_PINRA
AccessioniPrimary (citable) accession number: O24490
Entry historyiIntegrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: March 28, 2018
This is version 81 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
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Main funding by: National Institutes of Health