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Protein

Ras-related protein RABE1a

Gene

RABE1A

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Involved in membrane trafficking from the Golgi to the plasma membrane.By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi22 – 29GTPBy similarity8
Nucleotide bindingi70 – 74GTPBy similarity5
Nucleotide bindingi128 – 131GTPBy similarity4
Nucleotide bindingi159 – 160GTPBy similarity2

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processProtein transport, Transport
LigandGTP-binding, Nucleotide-binding

Enzyme and pathway databases

ReactomeiR-ATH-6798695 Neutrophil degranulation
R-ATH-8873719 RAB geranylgeranylation

Names & Taxonomyi

Protein namesi
Recommended name:
Ras-related protein RABE1a
Short name:
AtRABE1a
Alternative name(s):
Ras-related protein Rab8B
Short name:
AtRab8B
Gene namesi
Name:RABE1A
Synonyms:RAB8, RAB8B
Ordered Locus Names:At3g53610
ORF Names:F4P12.310
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G53610
TAIRilocus:2084056 AT3G53610

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cell membrane, Golgi apparatus, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004073321 – 216Ras-related protein RABE1aAdd BLAST216

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi213S-geranylgeranyl cysteineBy similarity1
Lipidationi214S-geranylgeranyl cysteineBy similarity1

Keywords - PTMi

Lipoprotein, Prenylation

Proteomic databases

PaxDbiO24466
PRIDEiO24466

Expressioni

Inductioni

By ethylene.1 Publication

Gene expression databases

ExpressionAtlasiO24466 baseline and differential
GenevisibleiO24466 AT

Interactioni

Subunit structurei

Interacts with PI5K2.1 Publication

Protein-protein interaction databases

BioGridi9846, 8 interactors
IntActiO24466, 5 interactors
STRINGi3702.AT3G53610.1

Structurei

3D structure databases

ProteinModelPortaliO24466
SMRiO24466
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi44 – 52Effector regionBy similarity9

Sequence similaritiesi

Belongs to the small GTPase superfamily. Rab family.Curated

Phylogenomic databases

eggNOGiKOG0078 Eukaryota
ENOG410XPUI LUCA
HOGENOMiHOG000233968
InParanoidiO24466
KOiK07901
OMAiNKCDWED
OrthoDBiEOG09360P8P
PhylomeDBiO24466

Family and domain databases

InterProiView protein in InterPro
IPR027417 P-loop_NTPase
IPR005225 Small_GTP-bd_dom
IPR001806 Small_GTPase
PfamiView protein in Pfam
PF00071 Ras, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
TIGRFAMsiTIGR00231 small_GTP, 1 hit
PROSITEiView protein in PROSITE
PS51419 RAB, 1 hit

Sequencei

Sequence statusi: Complete.

O24466-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAPPARARA DYDYLIKLLL IGDSGVGKSC LLLRFSDGSF TTSFITTIGI
60 70 80 90 100
DFKIRTIELD GKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE
110 120 130 140 150
SSFNNIRNWI RNIEQHASDS VNKILVGNKA DMDESKRAVP KSKGQALADE
160 170 180 190 200
YGMKFFETSA KTNLNVEEVF FSIAKDIKQR LADTDARAEP QTIKINQSDQ
210
GAGTSQATQK SACCGT
Length:216
Mass (Da):23,939
Last modified:January 1, 1998 - v1
Checksum:i1648E45B29D4EEB6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U82434 mRNA Translation: AAB65088.1
AL132966 Genomic DNA Translation: CAB67668.1
CP002686 Genomic DNA Translation: AEE79116.1
CP002686 Genomic DNA Translation: AEE79117.1
CP002686 Genomic DNA Translation: AEE79118.1
BT004779 mRNA Translation: AAO44045.1
AK228083 mRNA Translation: BAF00042.1
AK230120 mRNA Translation: BAF01936.1
AY086756 mRNA Translation: AAM63807.1
PIRiT45901
RefSeqiNP_001078278.1, NM_001084809.2
NP_190929.1, NM_115221.4
NP_850696.1, NM_180365.3
UniGeneiAt.10020

Genome annotation databases

EnsemblPlantsiAT3G53610.1; AT3G53610.1; AT3G53610
AT3G53610.2; AT3G53610.2; AT3G53610
AT3G53610.3; AT3G53610.3; AT3G53610
GeneIDi824529
GrameneiAT3G53610.1; AT3G53610.1; AT3G53610
AT3G53610.2; AT3G53610.2; AT3G53610
AT3G53610.3; AT3G53610.3; AT3G53610
KEGGiath:AT3G53610

Similar proteinsi

Entry informationi

Entry nameiRAE1A_ARATH
AccessioniPrimary (citable) accession number: O24466
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 3, 2011
Last sequence update: January 1, 1998
Last modified: May 23, 2018
This is version 128 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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