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Protein

Basic agglutinin

Gene

WBAI

Organism
Psophocarpus tetragonolobus (Winged bean) (Dolichos tetragonolobus)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Lectin.

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Lectin

Names & Taxonomyi

Protein namesi
Recommended name:
Basic agglutinin
Alternative name(s):
WBA I
Gene namesi
Name:WBAI
OrganismiPsophocarpus tetragonolobus (Winged bean) (Dolichos tetragonolobus)
Taxonomic identifieri3891 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaePsophocarpus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001051231 – 242Basic agglutininAdd BLAST242

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi45N-linked (GlcNAc...)1
Glycosylationi220N-linked (GlcNAc...)1

Keywords - PTMi

Glycoprotein

Structurei

Secondary structure

1242
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi3 – 10Combined sources8
Beta strandi18 – 22Combined sources5
Beta strandi32 – 35Combined sources4
Beta strandi47 – 54Combined sources8
Turni61 – 63Combined sources3
Beta strandi68 – 76Combined sources9
Beta strandi88 – 95Combined sources8
Helixi105 – 107Combined sources3
Turni108 – 110Combined sources3
Beta strandi113 – 115Combined sources3
Beta strandi120 – 125Combined sources6
Beta strandi134 – 146Combined sources13
Beta strandi148 – 152Combined sources5
Beta strandi161 – 168Combined sources8
Turni169 – 172Combined sources4
Beta strandi173 – 180Combined sources8
Turni181 – 184Combined sources4
Beta strandi185 – 192Combined sources8
Helixi195 – 198Combined sources4
Beta strandi201 – 211Combined sources11
Helixi214 – 216Combined sources3
Beta strandi226 – 235Combined sources10

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1WBFX-ray2.30A/B1-242[»]
1WBLX-ray2.50A/B/C/D2-242[»]
2D3SX-ray2.35A/B/C/D1-242[»]
2DTWX-ray2.40A/B/C/D2-242[»]
2DTYX-ray2.65A/B/C/D2-242[»]
2DU0X-ray2.70A/B/C/D2-242[»]
2DU1X-ray2.60A/B/C/D2-242[»]
2E51X-ray2.50A/B/C/D2-242[»]
2E53X-ray2.40A/B/C/D2-242[»]
2E7QX-ray2.75A/B/C/D2-238[»]
2E7TX-ray2.65A/B/C/D2-238[»]
2ZMKX-ray2.50A/B/C/D2-242[»]
2ZMLX-ray2.65A/B/C/D2-242[»]
2ZMNX-ray2.90A/B/C/D2-242[»]
ProteinModelPortaliO24313.
SMRiO24313.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO24313.

Family & Domainsi

Sequence similaritiesi

Belongs to the leguminous lectin family.Curated

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
InterProiIPR013320. ConA-like_dom.
IPR016363. L-lectin.
IPR019825. Lectin_legB_Mn/Ca_BS.
IPR001220. Legume_lectin_dom.
[Graphical view]
PfamiPF00139. Lectin_legB. 1 hit.
[Graphical view]
PIRSFiPIRSF002690. L-type_lectin_plant. 1 hit.
SUPFAMiSSF49899. SSF49899. 1 hit.
PROSITEiPS00307. LECTIN_LEGUME_BETA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O24313-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTISFNFNQ FHQNEEQLKL QRDARISSNS VLELTKVVNG VPTWNSTGRA
60 70 80 90 100
LYAKPVQVWD STTGNVASFE TRFSFSIRQP FPRPHPADGL VFFIAPPNTQ
110 120 130 140 150
TGEGGGYFGI YNPLSPYPFV AVEFDTFRNT WDPQIPHIGI DVNSVISTKT
160 170 180 190 200
VPFTLDNGGI ANVVIKYDAS TKILHVVLVF PSLGTIYTIA DIVDLKQVLP
210 220 230 240
ESVNVGFSAA TGDPSGKQRN ATETHDILSW SFSASLPGTN EF
Length:242
Mass (Da):26,615
Last modified:January 1, 1998 - v1
Checksum:i8BD4368E26F72294
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U60765 Genomic DNA. Translation: AAC49422.1.
PIRiS70467.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U60765 Genomic DNA. Translation: AAC49422.1.
PIRiS70467.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1WBFX-ray2.30A/B1-242[»]
1WBLX-ray2.50A/B/C/D2-242[»]
2D3SX-ray2.35A/B/C/D1-242[»]
2DTWX-ray2.40A/B/C/D2-242[»]
2DTYX-ray2.65A/B/C/D2-242[»]
2DU0X-ray2.70A/B/C/D2-242[»]
2DU1X-ray2.60A/B/C/D2-242[»]
2E51X-ray2.50A/B/C/D2-242[»]
2E53X-ray2.40A/B/C/D2-242[»]
2E7QX-ray2.75A/B/C/D2-238[»]
2E7TX-ray2.65A/B/C/D2-238[»]
2ZMKX-ray2.50A/B/C/D2-242[»]
2ZMLX-ray2.65A/B/C/D2-242[»]
2ZMNX-ray2.90A/B/C/D2-242[»]
ProteinModelPortaliO24313.
SMRiO24313.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiO24313.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
InterProiIPR013320. ConA-like_dom.
IPR016363. L-lectin.
IPR019825. Lectin_legB_Mn/Ca_BS.
IPR001220. Legume_lectin_dom.
[Graphical view]
PfamiPF00139. Lectin_legB. 1 hit.
[Graphical view]
PIRSFiPIRSF002690. L-type_lectin_plant. 1 hit.
SUPFAMiSSF49899. SSF49899. 1 hit.
PROSITEiPS00307. LECTIN_LEGUME_BETA. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiLEC1_PSOTE
AccessioniPrimary (citable) accession number: O24313
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: January 1, 1998
Last modified: November 2, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.