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O24313

- LEC1_PSOTE

UniProt

O24313 - LEC1_PSOTE

Protein

Basic agglutinin

Gene

WBAI

Organism
Psophocarpus tetragonolobus (Winged bean) (Dolichos tetragonolobus)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 70 (01 Oct 2014)
      Sequence version 1 (01 Jan 1998)
      Previous versions | rss
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    Functioni

    Lectin.

    GO - Molecular functioni

    1. carbohydrate binding Source: InterPro

    Keywords - Ligandi

    Lectin

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Basic agglutinin
    Alternative name(s):
    WBA I
    Gene namesi
    Name:WBAI
    OrganismiPsophocarpus tetragonolobus (Winged bean) (Dolichos tetragonolobus)
    Taxonomic identifieri3891 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaePsophocarpus

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 242242Basic agglutininPRO_0000105123Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi45 – 451N-linked (GlcNAc...)
    Glycosylationi220 – 2201N-linked (GlcNAc...)

    Keywords - PTMi

    Glycoprotein

    Structurei

    Secondary structure

    1
    242
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi3 – 108
    Beta strandi18 – 225
    Beta strandi32 – 354
    Beta strandi47 – 548
    Turni61 – 633
    Beta strandi68 – 769
    Beta strandi88 – 958
    Helixi105 – 1073
    Turni108 – 1103
    Beta strandi113 – 1153
    Beta strandi120 – 1256
    Beta strandi134 – 14613
    Beta strandi148 – 1525
    Beta strandi161 – 1688
    Turni169 – 1724
    Beta strandi173 – 1808
    Turni181 – 1844
    Beta strandi185 – 1928
    Helixi195 – 1984
    Beta strandi201 – 21111
    Helixi214 – 2163
    Beta strandi226 – 23510

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1WBFX-ray2.30A/B1-242[»]
    1WBLX-ray2.50A/B/C/D2-242[»]
    2D3SX-ray2.35A/B/C/D1-242[»]
    2DTWX-ray2.40A/B/C/D2-242[»]
    2DTYX-ray2.65A/B/C/D2-242[»]
    2DU0X-ray2.70A/B/C/D2-242[»]
    2DU1X-ray2.60A/B/C/D2-242[»]
    2E51X-ray2.50A/B/C/D2-242[»]
    2E53X-ray2.40A/B/C/D2-242[»]
    2E7QX-ray2.75A/B/C/D2-238[»]
    2E7TX-ray2.65A/B/C/D2-238[»]
    2ZMKX-ray2.50A/B/C/D2-242[»]
    2ZMLX-ray2.65A/B/C/D2-242[»]
    2ZMNX-ray2.90A/B/C/D2-242[»]
    ProteinModelPortaliO24313.
    SMRiO24313. Positions 2-238.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiO24313.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the leguminous lectin family.Curated

    Family and domain databases

    Gene3Di2.60.120.200. 1 hit.
    InterProiIPR008985. ConA-like_lec_gl_sf.
    IPR013320. ConA-like_subgrp.
    IPR016363. Lectin.
    IPR019825. Lectin_legB_Mn/Ca_BS.
    IPR001220. Legume_lectin_dom.
    [Graphical view]
    PfamiPF00139. Lectin_legB. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002690. L-type_lectin_plant. 1 hit.
    SUPFAMiSSF49899. SSF49899. 1 hit.
    PROSITEiPS00307. LECTIN_LEGUME_BETA. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    O24313-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKTISFNFNQ FHQNEEQLKL QRDARISSNS VLELTKVVNG VPTWNSTGRA    50
    LYAKPVQVWD STTGNVASFE TRFSFSIRQP FPRPHPADGL VFFIAPPNTQ 100
    TGEGGGYFGI YNPLSPYPFV AVEFDTFRNT WDPQIPHIGI DVNSVISTKT 150
    VPFTLDNGGI ANVVIKYDAS TKILHVVLVF PSLGTIYTIA DIVDLKQVLP 200
    ESVNVGFSAA TGDPSGKQRN ATETHDILSW SFSASLPGTN EF 242
    Length:242
    Mass (Da):26,615
    Last modified:January 1, 1998 - v1
    Checksum:i8BD4368E26F72294
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U60765 Genomic DNA. Translation: AAC49422.1.
    PIRiS70467.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U60765 Genomic DNA. Translation: AAC49422.1 .
    PIRi S70467.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1WBF X-ray 2.30 A/B 1-242 [» ]
    1WBL X-ray 2.50 A/B/C/D 2-242 [» ]
    2D3S X-ray 2.35 A/B/C/D 1-242 [» ]
    2DTW X-ray 2.40 A/B/C/D 2-242 [» ]
    2DTY X-ray 2.65 A/B/C/D 2-242 [» ]
    2DU0 X-ray 2.70 A/B/C/D 2-242 [» ]
    2DU1 X-ray 2.60 A/B/C/D 2-242 [» ]
    2E51 X-ray 2.50 A/B/C/D 2-242 [» ]
    2E53 X-ray 2.40 A/B/C/D 2-242 [» ]
    2E7Q X-ray 2.75 A/B/C/D 2-238 [» ]
    2E7T X-ray 2.65 A/B/C/D 2-238 [» ]
    2ZMK X-ray 2.50 A/B/C/D 2-242 [» ]
    2ZML X-ray 2.65 A/B/C/D 2-242 [» ]
    2ZMN X-ray 2.90 A/B/C/D 2-242 [» ]
    ProteinModelPortali O24313.
    SMRi O24313. Positions 2-238.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Miscellaneous databases

    EvolutionaryTracei O24313.

    Family and domain databases

    Gene3Di 2.60.120.200. 1 hit.
    InterProi IPR008985. ConA-like_lec_gl_sf.
    IPR013320. ConA-like_subgrp.
    IPR016363. Lectin.
    IPR019825. Lectin_legB_Mn/Ca_BS.
    IPR001220. Legume_lectin_dom.
    [Graphical view ]
    Pfami PF00139. Lectin_legB. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002690. L-type_lectin_plant. 1 hit.
    SUPFAMi SSF49899. SSF49899. 1 hit.
    PROSITEi PS00307. LECTIN_LEGUME_BETA. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Cloning and sequencing of winged bean (Psophocarpus tetragonolobus) basic agglutinin (WBA I): presence of second glycosylation site and its implications in quaternary structure."
      Sharma V., Srinivas V.R., Surolia A.
      FEBS Lett. 389:289-292(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "Carbohydrate specificity and quaternary association in basic winged bean lectin: X-ray analysis of the lectin at 2.5-A resolution."
      Prabu M.M., Sankaranarayanan R., Puri K.D., Sharma V., Surolia A., Vijayan M., Suguna K.
      J. Mol. Biol. 276:787-796(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (2.5 ANGSTROMS).

    Entry informationi

    Entry nameiLEC1_PSOTE
    AccessioniPrimary (citable) accession number: O24313
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 15, 1998
    Last sequence update: January 1, 1998
    Last modified: October 1, 2014
    This is version 70 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3