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Reviewed, UniProtKB/Swiss-Prot O24146 (4CL2_TOBAC)

Last modified September 22, 2009. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    4-coumarate--CoA ligase 2
      Short name=4CL 2
    EC=6.2.1.12
Alternative name(s):
    4-coumaroyl-CoA synthase 2
Gene names
Name: 4CL2
OrganismNicotiana tabacum (Common tobacco)
Taxonomic identifier4097 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsasteridslamiidsSolanalesSolanaceaeNicotianoideaeNicotianeaeNicotiana

Protein attributes

Sequence length542 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Catalytic activity

ATP + 4-coumarate + CoA = AMP + diphosphate + 4-coumaroyl-CoA.

Pathway

Phytoalexin biosynthesis; 3,4',5-trihydroxystilbene biosynthesis; 3,4',5-trihydroxystilbene from trans-4-coumarate: step 1/2.

Sequence similarities

Belongs to the ATP-dependent AMP-binding enzyme family.

Ontologies

Keywords
   Biological processPhenylpropanoid metabolism
   LigandATP-binding
Nucleotide-binding
   Molecular functionLigase
Gene Ontology (GO)
   Biological processphenylpropanoid metabolic process

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular function4-coumarate-CoA ligase activity

Inferred from electronic annotation. Source: EC

ATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 5425424-coumarate--CoA ligase 2
PRO_0000193041

Sequences

Sequence LengthMass (Da)Tools
O24146-1 [UniParc].

Last modified January 1, 1998. Version 1.
Checksum: CB5579AEDFCFC003

FASTA54259,480
        10         20         30         40         50         60 
MEKDTKQVDI IFRSKLPDIY IPNHLPLHSY CFENISEFSS RPCLINGANK QIYTYADVEL 

        70         80         90        100        110        120 
NSRKVAAGLH KQGIQPKDTI MILLPNSPEF VFAFIGASYL GAISTMANPL FTPAEVVKQA 

       130        140        150        160        170        180 
KASSAKIIVT QACHVNKVKD YAFENDVKII CIDSAPEGCL HFSVLTQANE HDIPEVEIQP 

       190        200        210        220        230        240 
DDVVALPYSS GTTGLPKGVM LTHKGLVTSV AQQVDGENPN LYIHSEDVML CVLPLFHIYS 

       250        260        270        280        290        300 
LNSVLLCGLR VGAAILIMQK FDIVSFLELI QRYKVTIGPF VPPIVLAIAK SPMVDDYDLS 

       310        320        330        340        350        360 
SVRTVMSGAA PLGKELEDTV RAKFPNAKLG QGYGMTEAGP VLAMCLAFAK EPFEIKSGAC 

       370        380        390        400        410        420 
GTVVRNAEMK IVDPKTGNSL PRNQSGEICI RGDQIMKGYL NDPEATARTI DKEGWLYTGD 

       430        440        450        460        470        480 
IGYIDDDDEL FIVDRLKELI KYKGFQVAPA ELEALLLNHP NISDAAVVPM KDEQAGEVPV 

       490        500        510        520        530        540 
AFVVRSNGST ITEDEVKDFI SKQVIFYKRI KRVFFVDAIP KSPSGKILRK DLRAKLAAGL 


PN 

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References

[1]"Two divergent members of a tobacco 4-coumarate:coenzyme A ligase (4CL) gene family. cDNA structure, gene inheritance and expression, and properties of recombinant proteins."
Lee D., Douglas C.J.
Plant Physiol. 112:193-205(1996) [PubMed: 8819324] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA].

Cross-references

Sequence databases

U50846 mRNA. Translation: AAB18638.1.
PIRT03789.

3D structure databases

HSSPHSSP built from PDB template 1LCI based on UniProtKB P08659.
ModBaseSearch...

Enzyme and pathway databases

BRENDA6.2.1.12. 298.

Family and domain databases

InterProIPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamPF00501. AMP-binding. 1 hit.
[Graphical view]
PROSITEPS00455. AMP_BINDING. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry name4CL2_TOBAC
AccessionPrimary (citable) accession number: O24146
Entry history
Integrated into UniProtKB/Swiss-Prot: January 11, 2001
Last sequence update: January 1, 1998
Last modified: September 22, 2009
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectPPAP (Plant Proteome Annotation Project)

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents